LOCUS BC015566 3549 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, Na+/K+ transporting, alpha 3 polypeptide, mRNA
(cDNA clone MGC:13276 IMAGE:4097948), complete cds.
ACCESSION BC015566
VERSION BC015566.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3549)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3549)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC015566.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: a Column: 18.
FEATURES Location/Qualifiers
source 1..3549
/db_xref="H-InvDB:HIT000037188"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13276 IMAGE:4097948"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3549
/gene="ATP1A3"
/gene_synonym="DYT12"
/gene_synonym="MGC13276"
/gene_synonym="RDP"
/db_xref="GeneID:478"
/db_xref="HGNC:HGNC:801"
/db_xref="MIM:182350"
CDS 117..3158
/gene="ATP1A3"
/gene_synonym="DYT12"
/gene_synonym="MGC13276"
/gene_synonym="RDP"
/codon_start=1
/product="ATPase, Na+/K+ transporting, alpha 3
polypeptide"
/protein_id="AAH15566.1"
/db_xref="GeneID:478"
/db_xref="HGNC:HGNC:801"
/db_xref="MIM:182350"
/translation="MGDKKDDKDSPKKNKGKERRDLDDLKKEVAMTEHKMSVEEVCRK
YNTDCVQGLTHSKAQEILARDGPNALTPPPTTPEWVKFCRQLFGGFSILLWIGAILCF
LAYGIQAGTEDDPSGDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQAL
VIREGEKMQVNAEEVVVGDLVEIKGGDRVPADLRIISAHGCKVDNSSLTGESEPQTRS
PDCTHDNPLETRNITFFSTNCVEGTARGVVVATGDRTVMGRIATLASGLEVGKTPIAI
EIEHFIQLITGVAVFLGVSFFILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCL
TLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADT
TEDQSGTSFDKSSHTWVALSHIAGLCNRAVFKGGQDNIPVLKRDVAGDASESALLKCI
ELSSGSVKLMRERNKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGAPERILDRC
STILLQGKEQPLDEEMKEAFQNAYLELGGLGERVLGFCHYYLPEEQFPKGFAFDCDDV
NFTTDNLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII
SEGNETVEDIAARLNIPVSQVNPRDAKACVIHGTDLKDFTSEQIDEILQNHTEIVFAR
TSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMIL
LDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITIL
CIDLGTDMVPAISLAYEAAESDIMKRQPRNPRTDKLVNERLISMAYGQIGMIQALGGF
FSYFVILAENGFLPGNLVGIRLNWDDRTVNDLEDSYGQQWTYEQRKVVEFTCHTAFFV
SIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMDVALRMYP
LKPSWWFCAFPYSFLIFVYDEIRKLILRRNPGGWVEKETYY"
BASE COUNT 748 a 1137 c 964 g 700 t
ORIGIN
1 cgcgcgcacc taccgaggcg cgggcgctgc agaggctccc agcccaagcc tgagcctgag
61 cccgccccga ggtccccgcc ccgcccgcct ggctctctcg ccgcggagcc gccaagatgg
121 gggacaagaa agatgacaag gactcaccca agaagaacaa gggcaaggag cgccgggacc
181 tggatgacct caagaaggag gtggctatga cagagcacaa gatgtcagtg gaagaggtct
241 gccggaaata caacacagac tgtgtgcagg gtttgaccca cagcaaagcc caggagatcc
301 tggcccggga tgggcctaac gcactcacgc caccgcctac caccccagag tgggtcaagt
361 tttgccggca gctcttcggg ggcttctcca tcctgctgtg gatcggggct atcctctgct
421 tcctggccta cggtatccag gcgggcaccg aggacgaccc ctctggtgac aacctgtacc
481 tgggcatcgt gctggcggcc gtggtgatca tcactggctg cttctcctac taccaggagg
541 ccaagagctc caagatcatg gagtccttca agaacatggt gccccagcaa gccctggtga
601 tccgggaagg tgagaagatg caggtgaacg ctgaggaggt ggtggtcggg gacctggtgg
661 agatcaaggg tggagaccga gtgccagctg acctgcggat catctcagcc cacggctgca
721 aggtggacaa ctcctccctg actggcgaat ccgagcccca gactcgctct cccgactgca
781 cgcacgacaa ccccttggag actcggaaca tcaccttctt ttccaccaac tgtgtggaag
841 gcacggctcg gggcgtggtg gtggccacgg gcgaccgcac tgtcatgggc cgtatcgcca
901 ccctggcatc agggctggag gtgggcaaga cgcccatcgc catcgagatt gagcacttca
961 tccagctcat caccggcgtg gctgtcttcc tgggtgtctc cttcttcatc ctctccctca
1021 ttctcggata cacctggctt gaggctgtca tcttcctcat cggcatcatc gtggccaatg
1081 tcccagaggg tctgctggcc actgtcactg tgtgtctgac gctgaccgcc aagcgcatgg
1141 cccggaagaa ctgcctggtg aagaacctgg aggctgtaga aaccctgggc tccacgtcca
1201 ccatctgctc agataagaca gggaccctca ctcagaaccg catgacagtc gcccacatgt
1261 ggtttgacaa ccagatccac gaggctgaca ccactgagga ccagtcaggg acctcatttg
1321 acaagagttc gcacacctgg gtggccctgt ctcacatcgc tgggctctgc aatcgcgctg
1381 tcttcaaggg tggtcaggac aacatccctg tgctcaagag ggatgtggct ggggatgcgt
1441 ctgagtctgc cctgctcaag tgcatcgagc tgtcctctgg ctccgtgaag ctgatgcgtg
1501 aacgcaacaa gaaagtggct gagattccct tcaattccac caacaaatac cagctctcca
1561 tccatgagac cgaggacccc aacgacaacc gatacctgct ggtgatgaag ggtgcccccg
1621 agcgcatcct ggaccgctgc tccaccatcc tgctacaggg caaggagcag cctctggacg
1681 aggaaatgaa ggaggccttc cagaatgcct accttgagct cggtggcctg ggcgagcgcg
1741 tgcttggttt ctgccattat tacctgcccg aggagcagtt ccccaagggc tttgccttcg
1801 actgtgatga cgtgaacttc accacggaca acctctgctt tgtgggcctc atgtccatga
1861 tcgacccacc ccgggcagcc gtccctgacg cggtgggcaa gtgtcgcagc gcaggcatca
1921 aggtcatcat ggtcaccggc gatcacccca tcacggccaa ggccattgcc aagggtgtgg
1981 gcatcatctc tgagggcaac gagactgtgg aggacatcgc cgcccggctc aacattcccg
2041 tcagccaggt taacccccgg gatgccaagg cctgcgtgat ccacggcacc gacctcaagg
2101 acttcacctc cgagcaaatc gacgagatcc tgcagaatca caccgagatc gtcttcgccc
2161 gcacatcccc ccagcagaag ctcatcattg tggagggctg tcagagacag ggtgcaattg
2221 tggctgtgac cggggatggt gtgaacgact cccccgctct gaagaaggcc gacattgggg
2281 tggccatggg catcgctggc tctgacgtct ccaagcaggc agctgacatg atcctgctgg
2341 acgacaactt tgcctccatc gtcacagggg tggaggaggg ccgcctgatc ttcgacaacc
2401 taaagaagtc cattgcctac accctgacca gcaatatccc ggagatcacg cccttcctgc
2461 tgttcatcat ggccaacatc ccgctgcccc tgggcaccat caccatcctc tgcatcgatc
2521 tgggcactga catggtccct gccatctcac tggcgtacga ggctgccgaa agcgacatca
2581 tgaagagaca gcccaggaac ccgcggacgg acaaattggt caatgagaga ctcatcagca
2641 tggcctacgg gcagattgga atgatccagg ctctcggtgg cttcttctct tactttgtga
2701 tcctggcaga aaatggcttc ttgcccggca acctggtggg catccggctg aactgggatg
2761 accgcaccgt caatgacctg gaagacagtt acgggcagca gtggacatac gagcagagga
2821 aggtggtgga gttcacctgc cacacggcct tctttgtgag catcgttgtc gtccagtggg
2881 ccgatctgat catctgcaag acccggagga actcggtctt ccagcagggc atgaagaaca
2941 agatcctgat cttcgggctg tttgaggaga cggccctggc tgccttcctg tcctactgcc
3001 ccggcatgga cgtggccctg cgcatgtacc ctctcaagcc cagctggtgg ttctgtgcct
3061 tcccctacag tttcctcatc ttcgtctacg acgaaatccg caaactcatc ctgcgcagga
3121 acccaggggg ttgggtggag aaggaaacct actactgacc tcagccccac cacatcgccc
3181 atctcttccc cgtcccgcag gcccaggacc gcccctgtca gtccccccaa ttttgtattc
3241 tggggggagg agccctctct tcctgtggcc ccaccttggc ccccaccccc tccactatct
3301 cctgccgccc ccactctggc tggcttctct cccctgcccc aaacctctct cctctctctt
3361 ttctgtgtca gtttctctcc ctctcctcac ccctctatcc attcctcccg ccccagccac
3421 ctccctgggc tcttttttac tccccttcag ccccccggct gatgccatct ctggttctgg
3481 acaattatca aatatatcag tggggagaga gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3541 aaaaaaaaa
//