LOCUS BC015548 1373 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB3A interacting protein (rabin3), mRNA (cDNA clone
MGC:9674 IMAGE:3846338), complete cds.
ACCESSION BC015548
VERSION BC015548.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1373)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1373)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: g Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66912193.
FEATURES Location/Qualifiers
source 1..1373
/db_xref="H-InvDB:HIT000037180"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9674 IMAGE:3846338"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1373
/gene="RAB3IP"
/gene_synonym="FLJ22548"
/gene_synonym="RABIN3"
/db_xref="GeneID:117177"
/db_xref="HGNC:HGNC:16508"
/db_xref="MIM:608686"
CDS 317..1081
/gene="RAB3IP"
/gene_synonym="FLJ22548"
/gene_synonym="RABIN3"
/codon_start=1
/product="RAB3A interacting protein (rabin3)"
/protein_id="AAH15548.1"
/db_xref="GeneID:117177"
/db_xref="HGNC:HGNC:16508"
/db_xref="MIM:608686"
/translation="MVREANIKQATAEKQLKEAQGKIDVLQAEVAALKTLVLSSSPTS
PTQEPLPGGKTPFKKGHTRNKSTSSAMSGSHQDLSVIQPIVKDCKEADLSLYNEFRLW
KDEPTMDRTCPFLDKIYQEDIFPCLTFSKSELASAVLEAVENNTLSIEPVGLQPIRFV
KASAVECGGPKKCALTGQSKSCKHRIKLGDSSNYYYISPFCRYRITSVCNFFTYIRYI
QQGLVKQQDVDQMFWEVMQLRKEMSLAKLGYFKEEL"
BASE COUNT 437 a 256 c 314 g 366 t
ORIGIN
1 ctaagcaagc ctgggcaatg gcgggcgtcc ctcccccagc ctcgttgccg ccttgcagtt
61 tgatctcaga ctgctgtgct agcaatcagc gagattccgt gggcgtagga ccctctgagc
121 caggtgtggg atatagtctc gtggtgcgcc gtttcttaag ccggtctgaa aagcgcaata
181 ttcggatggg agtgacccga ttttccagga actgaagtta aaagatgaag aatgtgagag
241 gctttcaaaa gtgcgagatc aacttggaca ggaattggaa gaactcacag ctagtctatt
301 tgaggaagct cataaaatgg tgagagaagc aaatatcaag caggcaacag cagaaaaaca
361 gctaaaagaa gcacaaggaa aaattgatgt acttcaagct gaagtagctg cattgaagac
421 acttgtattg tccagttctc caacatcacc tacgcaggag cctttgccag gtggaaagac
481 accttttaaa aaggggcata caagaaataa aagcacaagc agtgctatga gtggcagtca
541 tcaggacctc agtgtgatac agccaattgt aaaagactgc aaagaggctg acttatcctt
601 gtataatgaa ttccgattgt ggaaggatga gcccacaatg gacaggacgt gtcctttctt
661 agacaaaatc taccaggaag atatctttcc atgtttaaca ttctcaaaaa gtgagttggc
721 ttcagctgtt ctggaggctg tggaaaacaa tactctaagc attgaaccag tgggattaca
781 acctatccgg tttgtgaaag cttctgcagt tgaatgcgga ggaccaaaaa aatgtgctct
841 cactggccag agtaagtcct gtaaacacag aattaaatta ggggactcaa gcaactatta
901 ttatatttct cctttttgca gatacaggat cacttctgta tgtaactttt ttacatacat
961 tcgatacatt cagcagggac tcgtgaaaca gcaggatgtt gatcagatgt tttgggaggt
1021 tatgcagttg agaaaagaga tgtcattggc aaagctgggt tatttcaaag aggaactctg
1081 atgctctgcg tgggaccatg cctgaactcc ccgaataact gaaaaatggc tgaatatttt
1141 tatggttact tgatatttat ttccaaggag tgagcctaag acttttttcc ccttttgcaa
1201 attgctctaa gaagtaccat gatttctttt aaactgatct atgctgtgtt tgcttattct
1261 ttagttgaac acactatgaa gaattccagg tgtactagtg aatgtaattt atagttgcca
1321 aaaaaaaaaa aaacctgaaa taaataaatg ttagattgaa aaaaaaaaaa aaa
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