LOCUS BC015506 1442 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens peroxisomal biogenesis factor 3, mRNA (cDNA clone
MGC:9125 IMAGE:3914956), complete cds.
ACCESSION BC015506
VERSION BC015506.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1442)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1442)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: n Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4505726.
FEATURES Location/Qualifiers
source 1..1442
/db_xref="H-InvDB:HIT000037149"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9125 IMAGE:3914956"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1442
/gene="PEX3"
/gene_synonym="TRG18"
/db_xref="GeneID:8504"
/db_xref="HGNC:HGNC:8858"
/db_xref="MIM:603164"
CDS 162..1283
/gene="PEX3"
/gene_synonym="TRG18"
/codon_start=1
/product="peroxisomal biogenesis factor 3"
/protein_id="AAH15506.1"
/db_xref="GeneID:8504"
/db_xref="HGNC:HGNC:8858"
/db_xref="MIM:603164"
/translation="MLRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQERE
AAEYIAQARRQYHFESNQRTCNMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLE
IWEDLKIISFTRSTVAVYSTCMLVVLLRVQLNIIGGYIYLDNAAVGKNGTTILAPPDV
QQQYLSSIQHLLGDGLTELITVIKQAVQKVLGSVSLKHSLSLLDLEQKLKEIRNLVEQ
HKSSSWINKDGSKPLLCHYMMPDEETPLAVQACGLSPRDITTIKLLNETRDMLESPDF
STVLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLPLAKIIPIVNGQIH
SVCSETPSHFVQDLLTMEQVKDFAANVYEAFSTPQQLEK"
BASE COUNT 460 a 285 c 303 g 394 t
ORIGIN
1 ccggtgacag tctctgcgga aagtcacgtt tgtgatttcg ggagagcaca gaacgggacg
61 acggcgctct tgctgggtca tctgggccag gtgacgaaga aacagtttcc tggtgaagca
121 gtccctcacc cctagtcagc ccacacccct agggcctaaa gatgctgagg tctgtatgga
181 attttctgaa acgccacaaa aagaaatgca tcttcctggg cacggtcctt ggaggagtat
241 atattctggg gaaatatgga cagaagaaaa tcagagaaat acaggaaagg gaggctgcag
301 aatacattgc ccaagcacga cgacaatatc attttgaaag taaccagagg acttgcaata
361 tgacagtgct gtccatgctt ccaacactga gagaggcctt aatgcagcaa ctgaattccg
421 agagcctcac agctctgcta aaaaacaggc cttcaaacaa gctagaaata tgggaggatc
481 tgaagataat aagtttcaca agaagtactg tggctgtata cagtacctgt atgctggttg
541 ttcttttgcg ggtccagtta aacataattg gtggatatat ttacctggat aatgcagcag
601 ttggcaaaaa tggcactaca attcttgctc ccccagatgt ccaacagcag tatttatcaa
661 gtattcagca cctacttgga gatggcctga cagaattgat cactgtcatt aaacaagctg
721 tgcagaaggt tttaggaagt gtttctctta aacattcttt gtcccttttg gacttggagc
781 aaaaactaaa agaaatcaga aatctcgttg agcagcataa gtcttcttct tggattaata
841 aagatggatc caaaccttta ttatgccatt atatgatgcc agatgaagaa actccattag
901 cagtgcaggc ctgtggactt tctcctcgag acattaccac tattaaactt ctcaatgaaa
961 ctagagacat gttggaaagc ccagatttta gtacagtttt gaatacctgt ttaaaccgag
1021 gttttagtag acttctagac aatatggctg agttctttcg acctactgaa caggacctgc
1081 aacatggtaa ctctatgaat agtctttcca gtgtcagcct gcctttagct aagataattc
1141 caatagtaaa cggacagatc cattcagttt gcagtgaaac acctagtcat tttgttcagg
1201 atctgttgac aatggagcaa gtgaaagact ttgctgctaa tgtgtatgaa gcttttagta
1261 cccctcagca actggagaaa tgatttttcc ttcaagaaaa actacagtgg gattcattta
1321 ctttttaaaa tacactgggt aaatcaccta tacttagagt aacagtttgt tatcaaaatg
1381 cctgataaaa tatattctta ataaaagtct tcatttcata atgaaaaaaa aaaaaaaaaa
1441 aa
//