LOCUS BC015502 1445 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens homer homolog 1 (Drosophila), mRNA (cDNA clone
MGC:9092 IMAGE:3904242), complete cds.
ACCESSION BC015502
VERSION BC015502.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1445)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1445)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: h Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46249345.
FEATURES Location/Qualifiers
source 1..1445
/db_xref="H-InvDB:HIT000037145"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9092 IMAGE:3904242"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_70"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1445
/gene="HOMER1"
/gene_synonym="HOMER1A"
/gene_synonym="HOMER1B"
/gene_synonym="HOMER1C"
/gene_synonym="SYN47"
/gene_synonym="Ves-1"
/db_xref="GeneID:9456"
/db_xref="HGNC:HGNC:17512"
/db_xref="MIM:604798"
CDS 278..1342
/gene="HOMER1"
/gene_synonym="HOMER1A"
/gene_synonym="HOMER1B"
/gene_synonym="HOMER1C"
/gene_synonym="SYN47"
/gene_synonym="Ves-1"
/codon_start=1
/product="homer homolog 1 (Drosophila)"
/protein_id="AAH15502.1"
/db_xref="GeneID:9456"
/db_xref="HGNC:HGNC:17512"
/db_xref="MIM:604798"
/translation="MGEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNV
YRIISLDGSKAIINSTITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEHHLSKFAEK
FQEFKEAARLAKEKSQEKMELTSTPSQESAGGDLQSPLTPESINGTDDERTPDVTQNS
EPRAEPTQNALPFSHSSAISKHWEAELATLKGNNAKLTAALLESTANVKQWKQQLAAY
QEEAERLHKRVTELECVSSQANAVHTHKTELNQTIQELEETLKLKEEEIERLKQEIDN
ARELQEQRDSLTQKLQEVEIRNKDLEGQLSDLEQRLEKSQNEQEAFRNNLKTLLEILD
GKIFELTELRDNLAKLLECS"
BASE COUNT 523 a 284 c 315 g 323 t
ORIGIN
1 attttgtgga atagagttga tcgctgtctc ctccgcaaag cattttaact cgaataagca
61 aatgccgcct ctgtttgaac gttttggtat ttacaagaga gaaatcattt tacctaagag
121 aactaattga attggcagca tccttgaaat acctccggac aaggatctgg gggtgggggt
181 ggaaaagcaa ctgcgaaata gcagacggag aaattccttt ggaagttatt ccgtagcata
241 agagctgaaa cttcagagca agttttcatt gggcaaaatg ggggaacaac ctatcttcag
301 cactcgagct catgtcttcc aaattgaccc aaacacaaag aagaactggg tacccaccag
361 caagcatgca gttactgtgt cttatttcta tgacagcaca agaaatgtgt ataggataat
421 cagtttagat ggctcaaagg caataataaa tagtaccatc accccaaaca tgacatttac
481 taaaacatct cagaagtttg gccagtgggc tgatagccgg gcaaacaccg tttatggatt
541 gggattctcc tctgagcatc atctttcgaa atttgcagaa aagtttcagg aatttaaaga
601 agctgctcga ctagcaaagg aaaaatcaca agagaagatg gaacttacca gtacaccttc
661 acaggaatcc gcaggcgggg atcttcagtc tcctttaaca ccggaaagta tcaacgggac
721 agatgatgaa agaacacctg atgtgacaca gaactcagag ccaagggctg aaccaactca
781 gaatgcattg ccattttcac atagttcagc aatcagcaaa cattgggagg ctgaactggc
841 taccctcaaa ggaaataatg ccaaactcac tgcagccctg ctggagtcca ctgccaatgt
901 gaaacaatgg aaacagcaac ttgctgccta tcaagaggaa gcagaacgtc tgcacaagcg
961 ggtgactgaa cttgaatgtg ttagtagcca agcaaatgca gtacatactc ataagacaga
1021 attaaatcag acaatacaag aactggaaga gacactgaaa ctgaaggaag aggaaataga
1081 aaggttaaaa caagaaattg ataatgccag agaactacaa gaacagaggg attctttgac
1141 tcagaaacta caggaagtag aaattcggaa caaagacctg gagggacaac tgtctgactt
1201 agagcaacgt ctggagaaaa gtcagaatga acaagaagct tttcgcaata acctgaagac
1261 actcttagaa attctggatg gaaagatatt tgaactaaca gaattacgag ataacttggc
1321 caagctacta gaatgcagct aaggaaagtg aaatttcagt gccaattaat taaaagatac
1381 actgtctctc ttcataggac tgtttaggct ctgcatcaag attgcacaaa aaaaaaaaaa
1441 aaaaa
//