LOCUS BC015471 2097 bp mRNA linear HUM 20-OCT-2005
DEFINITION Homo sapiens chromosome 8 open reading frame 30A, mRNA (cDNA clone
IMAGE:3845929), partial cds.
ACCESSION BC015471
VERSION BC015471.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2097)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2097)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: f Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13124772.
FEATURES Location/Qualifiers
source 1..2097
/db_xref="H-InvDB:HIT000088704_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3845929"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_65"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2097
/gene="C8orf30A"
/gene_synonym="FLJ40907"
/db_xref="GeneID:51236"
/db_xref="HGNC:HGNC:24161"
/db_xref="IMGT/GENE-DB:24161"
/db_xref="MIM:24161"
CDS <1..771
/gene="C8orf30A"
/gene_synonym="FLJ40907"
/codon_start=1
/product="C8orf30A protein"
/protein_id="AAH15471.1"
/db_xref="GeneID:51236"
/db_xref="HGNC:HGNC:24161"
/db_xref="IMGT/GENE-DB:24161"
/db_xref="MIM:24161"
/translation="QQSVARHGGGRGWRWRLGRAGGKPGGRGGEAAALPGAPLHYLAP
LLSNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSSVRRGGVVGTLRNCCFEHRHHEW
LLGPEVDILPFLLLPLAGPEDFSEEEMQRLPVDLQYLPPDKQREPDADIRKMLVEAIM
LLTATAPGRQQVRDQGAYLILRELHSWEPEPDVRTACEKLIQVLIGDEPERGMENLLE
VQVPEDVEQQLQQLDCREQEQLERELAPEPWVERATPT"
BASE COUNT 398 a 672 c 596 g 431 t
ORIGIN
1 cagcagagtg tcgctcgaca tgggggaggc cggggctggc gctggcgcct cgggagggcc
61 ggaggcaagc ccggaggcag aggtggtgaa gctgctgccc ttcctggcgc gcccctgcac
121 tacctagcgc cgctgctctc caacctcagc caacgccctg cggcgcgggc cttcctactg
181 gaccccgaca ggtgcgtggt ccagcggctg ctgcccctta cccagtaccc cgactcctct
241 gtacgcaggg gcggggtggt ggggacgctg cggaattgct gcttcgagca ccgacatcac
301 gagtggttgc ttggacctga ggtggacatt ctcccctttt tgctcctgcc cttggctggg
361 cctgaggatt tctccgagga agagatgcaa cggctgcctg tcgacttgca gtacctgcca
421 ccagacaagc agcgagaacc tgatgcagac atccgcaaga tgcttgttga agccatcatg
481 ctgctgacag ccacagcacc aggtcggcag caggtgcggg accagggagc ctacctgatc
541 cttcgagagc tgcacagctg ggagccggag cccgacgtgc ggacggcttg tgagaagctc
601 atccaggtgc ttattgggga cgagcctgaa cgtggcatgg aaaacctgct ggaggtgcag
661 gtgcctgagg atgtggagca gcagctgcag cagctggatt gcagggagca ggagcagttg
721 gagcgggagc tggccccaga gccatgggtg gagagggcca cacccacctg aggcccctgc
781 agccggacac cagctccagg gtcccctttg ccaggctttc tcagaccagg ccttcctgca
841 gctgtctgca ggccccctgg gtccccttgt tcagagactg tgctcttctg agaagcagag
901 ctacgcttag gctccagtaa ggattggagg cactttccag ccctgtgcag tgttgctacc
961 agcaagaatg aaggttgtgc agagcagtac tgtgaggtag gcaccgtgac tcggctgcct
1021 gtgcagaagg tggaggtggc aggcggatgg ccagggagcc atgagaagac tcttcctggg
1081 cacggcgtgg ggactggaca gaaaaccact gcaagcccca aggagccagc tgaagcctcc
1141 caatccccag ggcactgcag agtctgggca gaggtgggcg cataggtaca agtgctgctt
1201 tgtcagcctc actccctgca gctctcagct ccctgttccc tgagacctgg cctcaaaggg
1261 ctgacccagc catacgtaga tcctggggtc tttctaggac tgtgcctccc tgcttgacct
1321 atgctccagg accctgccct caacccttgt cagctcccta agtcttcctg tttcccagtc
1381 tcagattgag tgggtgctct cattggcctc tctagctagg ccgtctccct ggtcagcttc
1441 cttgagcctg ggccactcct ccctggcctt cttacctctg ccaagagcct ccagatgtgc
1501 ctgcagccta gtccctgccc aagcttctcc cccagccacc ctctgcccct gtggtagagc
1561 ccactatagg cccaggcgcc ttacgtgctt ctcccctgga cctatgtgca tccctcacct
1621 gccagttatg tggctgccaa gccccacagg ctgtcatggt ggctcttgcc acacttccct
1681 tcctgagctg acctgacctc actgccacct cttgcattgg gatcctgagg gctggcccct
1741 gctcactgat gggccctccc aggcccgtca agccctggtg aaggagctta gcttgtcttc
1801 ttggcaattc acaatgcctc actccacacc ctaaaactgg agcgtcccct atggtctcct
1861 gctgtggctt gggtgccggg cgtctcccgc ctccaggatc tcctctcacc tgcccccatt
1921 aaagctctgc cactcatgca ggcatgtgtg gaccatgttt tcccctggcc agagccccca
1981 cctgccactg gaggccagtt gccctcttag cactcagaca tcagcactgt cttcacagaa
2041 taaatgcttt atctggcctt gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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