LOCUS BC015463 785 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens splicing factor 3B, 14 kDa subunit, mRNA (cDNA clone
MGC:8723 IMAGE:3914184), complete cds.
ACCESSION BC015463
VERSION BC015463.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 785)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 785)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 22 Row: m Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54607092.
FEATURES Location/Qualifiers
source 1..785
/db_xref="H-InvDB:HIT000037124"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8723 IMAGE:3914184"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..785
/gene="SF3B14"
/gene_synonym="CGI-110"
/gene_synonym="HSPC175"
/gene_synonym="Ht006"
/gene_synonym="P14"
/gene_synonym="SAP14"
/gene_synonym="SF3B14a"
/db_xref="GeneID:51639"
/db_xref="MIM:607835"
CDS 216..593
/gene="SF3B14"
/gene_synonym="CGI-110"
/gene_synonym="HSPC175"
/gene_synonym="Ht006"
/gene_synonym="P14"
/gene_synonym="SAP14"
/gene_synonym="SF3B14a"
/codon_start=1
/product="splicing factor 3B, 14 kDa subunit"
/protein_id="AAH15463.1"
/db_xref="GeneID:51639"
/db_xref="MIM:607835"
/translation="MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGP
IRQIRVGNTPETRGTAYVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMD
TKKKEEQLKLLKEKYGINTDPPK"
BASE COUNT 244 a 158 c 170 g 213 t
ORIGIN
1 cgagtctcgc tcaggctcgg ttttaccccg gagtctattc gaagggggct gctacgtcag
61 cgcgtctcag cgtaagacgg cgctattccg ctgtaacagc ttccggcggg tcctggatgt
121 tgatgtcctg catctaacgc ggtgtaaccc ccgaagccga gcgagctccg gaggaatttc
181 agtatctgct acggtaactt catcagcccg ccaagatggc gatgcaagcg gccaagaggg
241 cgaacattcg acttccacct gaagtaaatc ggatattgta tataagaaat ttgccataca
301 aaatcacagc tgaagaaatg tatgatatat ttgggaaata tggacctatt cgtcaaatca
361 gagtggggaa cacacctgaa actagaggaa cagcttatgt ggtctatgag gacatctttg
421 atgccaagaa tgcatgtgat cacctatcgg gattcaatgt ttgtaacaga taccttgtgg
481 ttttgtacta taatgccaac agggcatttc agaagatgga cacaaagaag aaggaggaac
541 agttgaagct tctcaaggag aaatatggca tcaacacaga tccaccaaaa taaatgtttt
601 ctacattttc atttggacta aatcccacga atgacaacta ccaccttttt ttccttttta
661 attaatacta aatattgtga tttcttattt gaggttcaaa atgacctgct tgaaactttg
721 atacatattg gaatacatta tgttaataaa cttgtagctt tttgtgaaac aaaaaaaaaa
781 aaaaa
//