LOCUS BC015356 1169 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
1, mRNA (cDNA clone MGC:21459 IMAGE:3452219), complete cds.
ACCESSION BC015356
VERSION BC015356.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1169)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1169)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: a Column: 22.
FEATURES Location/Qualifiers
source 1..1169
/db_xref="H-InvDB:HIT000037094"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21459 IMAGE:3452219"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1169
/gene="PSMA1"
/gene_synonym="HC2"
/gene_synonym="MGC14542"
/gene_synonym="MGC14575"
/gene_synonym="MGC14751"
/gene_synonym="MGC1667"
/gene_synonym="MGC21459"
/gene_synonym="MGC22853"
/gene_synonym="MGC23915"
/gene_synonym="NU"
/gene_synonym="PROS30"
/db_xref="GeneID:5682"
/db_xref="HGNC:HGNC:9530"
/db_xref="MIM:602854"
CDS 50..841
/gene="PSMA1"
/gene_synonym="HC2"
/gene_synonym="MGC14542"
/gene_synonym="MGC14575"
/gene_synonym="MGC14751"
/gene_synonym="MGC1667"
/gene_synonym="MGC21459"
/gene_synonym="MGC22853"
/gene_synonym="MGC23915"
/gene_synonym="NU"
/gene_synonym="PROS30"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, alpha
type, 1"
/protein_id="AAH15356.1"
/db_xref="GeneID:5682"
/db_xref="HGNC:HGNC:9530"
/db_xref="MIM:602854"
/translation="MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHA
VLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRP
LPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMS
IGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD
LEFTIYDDDDVSPFLEGLEERPQRKAQPAQPADEPAEKADEPMEH"
BASE COUNT 356 a 223 c 249 g 341 t
ORIGIN
1 cttgattctc agttttgctg gaggccgcaa ccaggcccgc gccgccacca tgtttcgaaa
61 tcagtatgac aatgatgtca ctgtttggag cccccagggc aggattcatc aaattgaata
121 tgcaatggaa gctgttaaac aaggttcagc cacagttggt ctgaaatcaa aaactcatgc
181 agttttggtt gcattgaaaa gggcgcaatc agagcttgca gctcatcaga aaaaaattct
241 ccatgttgac aaccatattg gtatctcaat tgcggggctt actgctgatg ctagactgtt
301 atgtaatttt atgcgtcagg agtgtttgga ttccagattt gtattcgata gaccactgcc
361 tgtgtctcgt cttgtatctc taattggaag caagacccag ataccaacac aacgatatgg
421 ccggagacca tatggtgttg gtctccttat tgctggttat gatgatatgg gccctcacat
481 tttccaaacc tgtccatctg ctaactattt tgactgcaga gccatgtcca ttggagcccg
541 ttcccaatca gctcgtactt acttggagag acatatgtct gaatttatgg agtgtaattt
601 aaatgaacta gttaaacatg gtctgcgtgc cttaagagag acgcttcctg cagaacagga
661 cctgactaca aagaatgttt ccattggaat tgttggtaaa gacttggagt ttacaatcta
721 tgatgatgat gatgtgtctc cattcctgga aggtcttgaa gaaagaccac agagaaaggc
781 acagcctgct caacctgctg atgaacctgc agaaaaggct gatgaaccaa tggaacatta
841 agtgataagc cagtctatat atgtattatc aaatatgtaa gaatacaggc accacatact
901 gatgacaata atctatactt tgaaccaaaa gttgcagagt ggtggaatgc tatgttttag
961 gaatcagtcc agatgtgagt tttttccaag caacctcact gaaacctata taatggaata
1021 catttttctt tgaaagggtc tgtataatca ttttctagaa agtatgggta tctatactaa
1081 tgtttttata tgaagaacat aggtgtcttt gtggttttaa agacaactgt gaaataaaat
1141 tgtttcaccg ccaaaaaaaa aaaaaaaaa
//