LOCUS BC015236 1732 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DNA-damage-inducible transcript 4, mRNA (cDNA clone
MGC:17872 IMAGE:3906374), complete cds.
ACCESSION BC015236
VERSION BC015236.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1732)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1732)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: p Column: 1.
FEATURES Location/Qualifiers
source 1..1732
/db_xref="H-InvDB:HIT000037064"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17872 IMAGE:3906374"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1732
/gene="DDIT4"
/gene_synonym="Dig2"
/gene_synonym="FLJ20500"
/gene_synonym="REDD-1"
/gene_synonym="REDD1"
/gene_synonym="RP11-442H21.1"
/gene_synonym="RTP801"
/db_xref="GeneID:54541"
/db_xref="HGNC:HGNC:24944"
/db_xref="MIM:607729"
CDS 177..875
/gene="DDIT4"
/gene_synonym="Dig2"
/gene_synonym="FLJ20500"
/gene_synonym="REDD-1"
/gene_synonym="REDD1"
/gene_synonym="RP11-442H21.1"
/gene_synonym="RTP801"
/codon_start=1
/product="DNA-damage-inducible transcript 4"
/protein_id="AAH15236.1"
/db_xref="GeneID:54541"
/db_xref="HGNC:HGNC:24944"
/db_xref="MIM:607729"
/translation="MPSLWDRFSSSSTSSSPSSLPRTPTPDRPPRSAWGSATREEGFD
RSTSLESSDCESLDSSNSGFGPEEDTAYLDGVSLPDFELLSDPEDEHLCANLMQLLQE
SLAQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSV
GQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLFSSANSPFLPGFSQSLTLSTGFRVIK
KKLYSSEQLLIEEC"
BASE COUNT 347 a 459 c 536 g 390 t
ORIGIN
1 gcgagcgtgg acctgggacg ggtctgggcg gctctcggtg gttggcacgg gttcgcacac
61 ccattcaagc ggcaggacgc acttgtctta gcagttctcg ctgaccgcgc tagctgcggc
121 ttctacgctc cggcactctg agttcatcag caaacgccct ggcgtctgtc ctcaccatgc
181 ctagcctttg ggaccgcttc tcgtcgtcgt ccacctcctc ttcgccctcg tccttgcccc
241 gaactcccac cccagatcgg ccgccgcgct cagcctgggg gtcggcgacc cgggaggagg
301 ggtttgaccg ctccacgagc ctggagagct cggactgcga gtccctggac agcagcaaca
361 gtggcttcgg gccggaggaa gacacggctt acctggatgg ggtgtcgttg cccgacttcg
421 agctgctcag tgaccctgag gatgaacact tgtgtgccaa cctgatgcag ctgctgcagg
481 agagcctggc ccaggcgcgg ctgggctctc gacgccctgc gcgcctgctg atgcctagcc
541 agttggtaag ccaggtgggc aaagaactac tgcgcctggc ctacagcgag ccgtgcggcc
601 tgcggggggc gctgctggac gtctgcgtgg agcagggcaa gagctgccac agcgtgggcc
661 agctggcact cgaccccagc ctggtgccca ccttccagct gaccctcgtg ctgcgcctgg
721 actcacgact ctggcccaag atccaggggc tgtttagctc cgccaactct cccttcctcc
781 ctggcttcag ccagtccctg acgctgagca ctggcttccg agtcatcaag aagaagctgt
841 acagctcgga acagctgctc attgaggagt gttgaacttc aacctgaggg ggccgacagt
901 gccctccaag acagagacga ctgaactttt ggggtggaga ctagaggcag gagctgaggg
961 actgattcca gtggttggaa aactgaggca gccacctaag gtggaggtgg gggaatagtg
1021 tttcccagga agctcattga gttgtgtgcg ggtggctgtg cattggggac acatacccct
1081 cagtactgta gcatgaaaca aaggcttagg ggccaacaag gcttccagct ggatgtgtgt
1141 gtagcatgta ccttattatt tttgttactg acagttaaca gtggtgtgac atccagagag
1201 cagctgggct gctcccgccc cagcctggcc cagggtgaag gaagaggcac gtgctcctca
1261 gagcagccgg agggaggggg gaggtcggag gtcgtggagg tggtttgtgt atcttactgg
1321 tctgaaggga ccaagtgtgt ttgttgtttg ttttgtatct tgtttttctg atcggagcat
1381 cactactgac ctgttgtagg cagctatctt acagacgcat gaatgtaaga gtaggaaggg
1441 gtgggtgtca gggatcactt gggatctttg acacttgaaa aattacacct ggcagctgcg
1501 tttaagcctt cccccatcgt gtactgcaga gttgagctgg caggggaggg gctgagaggg
1561 tgggggctgg aacccctccc cgggaggagt gccatctggg tcttccatct agaactgttt
1621 acatgaagat aagatactca ctgttcatga atacacttga tgttcaagta ttaagaccta
1681 tgcaatattt tttacttttc taataaacat gtttgttaaa aaaaaaaaaa aa
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