LOCUS BC015191 1876 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens PDZ binding kinase, mRNA (cDNA clone MGC:14638
IMAGE:4082846), complete cds.
ACCESSION BC015191
VERSION BC015191.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1876)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1876)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: c Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18490990.
FEATURES Location/Qualifiers
source 1..1876
/db_xref="H-InvDB:HIT000037045"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14638 IMAGE:4082846"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1876
/gene="PBK"
/gene_synonym="FLJ14385"
/gene_synonym="Nori-3"
/gene_synonym="SPK"
/gene_synonym="TOPK"
/db_xref="GeneID:55872"
/db_xref="HGNC:HGNC:18282"
CDS 179..1147
/gene="PBK"
/gene_synonym="FLJ14385"
/gene_synonym="Nori-3"
/gene_synonym="SPK"
/gene_synonym="TOPK"
/codon_start=1
/product="PDZ binding kinase"
/protein_id="AAH15191.1"
/db_xref="GeneID:55872"
/db_xref="HGNC:HGNC:18282"
/translation="MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGV
NVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRA
FTEANDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQE
KKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAV
EENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAALG
TRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV"
BASE COUNT 623 a 309 c 370 g 574 t
ORIGIN
1 ggagggttcg aattgcaacg gcagctgccg ggcgtatgtg ttggtgctag aggcagctgc
61 agggtctcgc tgggggccgc tcgggaccaa ttttgaagag gtacttggcc acgacttatt
121 ttcacctccg acctttcctt ccaggcggtg agactctgga ctgagagtgg ctttcacaat
181 ggaagggatc agtaatttca agacaccaag caaattatca gaaaaaaaga aatctgtatt
241 atgttcaact ccaactataa atatcccggc ctctccattt atgcagaagc ttggctttgg
301 tactggggta aatgtgtacc taatgaaaag atctccaaga ggtttgtctc attctccttg
361 ggctgtaaaa aagattaatc ctatatgtaa tgatcattat cgaagtgtgt atcaaaagag
421 actaatggat gaagctaaga ttttgaaaag ccttcatcat ccaaacattg ttggttatcg
481 tgcttttact gaagccaatg atggcagtct gtgtcttgct atggaatatg gaggtgaaaa
541 gtctctaaat gacttaatag aagaacgata taaagccagc caagatcctt ttccagcagc
601 cataatttta aaagttgctt tgaatatggc aagagggtta aagtatctgc accaagaaaa
661 gaaactgctt catggagaca taaagtcttc aaatgttgta attaaaggcg attttgaaac
721 aattaaaatc tgtgatgtag gagtctctct accactggat gaaaatatga ctgtgactga
781 ccctgaggct tgttacattg gcacagagcc atggaaaccc aaagaagctg tggaggagaa
841 tggtgttatt actgacaagg cagacatatt tgcctttggc cttactttgt gggaaatgat
901 gactttatcg attccacaca ttaatctttc aaatgatgat gatgatgaag ataaaacttt
961 tgatgaaagt gattttgatg atgaagcata ctatgcagcg ttgggaacta ggccacctat
1021 taatatggaa gaactggatg aatcatacca gaaagtaatt gaactcttct ctgtatgcac
1081 taatgaagac cctaaagatc gtccttctgc tgcacacatt gttgaagctc tggaaacaga
1141 tgtctagtga tcatctcagc tgaagtgtgg cttgcgtaaa taactgttta ttccaaaata
1201 tttacatagt tactatcagt agttattaga ctctaaaatt ggcatatttg aggaccatag
1261 tttcttgtta acatatggat aactatttct aatatgaaat atgcttatat tggctataag
1321 cacttggaat tgtactgggt tttctgtaaa gttttagaaa ctagctacat aagtactttg
1381 atactgctca tgctgactta aaacactagc agtaaaacgc tgtaaactgt aacattaaat
1441 tgaatgacca ttacttttat taatgatctt tcttaaatat tctatatttt aatggatcta
1501 ctgacattag cactttgtac agtacaaaat aaagtctaca tttgtttaaa acactgaacc
1561 ttttgctgat gtgtttatca aatgataact ggaagctgag gagaatatgc ctcaaaaaga
1621 gtagctcctt ggatacttca gactctggtt acagattgtc ttgatctctt ggatctcctc
1681 agatctttgg tttttgcttt aatttattaa atgtattttc catactgagt ttaaaattta
1741 ttaatttgta ccttaagcat ttcccagctg tgtaaaaaca ataaaactca aataggatga
1801 taaagaataa aggacacttt gggtaccaga aaaaaaaaaa aaaaataaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaa
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