LOCUS BC015180 3259 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens homeobox A3, mRNA (cDNA clone MGC:10155
IMAGE:3905733), complete cds.
ACCESSION BC015180
VERSION BC015180.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3259)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3259)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 14 Row: p Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24497511.
FEATURES Location/Qualifiers
source 1..3259
/db_xref="H-InvDB:HIT000037038"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10155 IMAGE:3905733"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3259
/gene="HOXA3"
/gene_synonym="MGC10155"
/db_xref="GeneID:3200"
/db_xref="HGNC:HGNC:5104"
/db_xref="MIM:142954"
CDS 201..1532
/gene="HOXA3"
/gene_synonym="MGC10155"
/codon_start=1
/product="homeobox A3"
/protein_id="AAH15180.1"
/db_xref="GeneID:3200"
/db_xref="HGNC:HGNC:5104"
/db_xref="MIM:142954"
/translation="MQKATYYDSSAIYGGYPYQAANGFAYNANQQPYPASAALGADGE
YHRPACSLQSPSSAGGHPKAHELSEACLRTLSAPPSQPPSLGEPPLHPPPPQAAPPAP
QPPQPAPQPPAPTPAAPPPPSSASPPQNASNNPTPANAAKSPLLNSPTVAKQIFPWMK
ESRQNTKQKTSSSSSGESCAGDKSPPGQASSKRARTAYTSAQLVELEKEFHFNRYLCR
PRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQSPSRSPVPPGAGGY
LNSMHSLVNSVPYEPQSPPPFSKPPQGTYGLPPASYPASLPSCAPPPPPQKRYTAAGA
GAGGTPDYDPHAHGLQGNGSYGTPHIQGSPVFVGGSYVEPMSNSGPALFGLTHLPHAA
SGAMDYGGAGPLGSGHHHGPGPGEPHPTYTDLTGHHPSQGRIQEAPKLTHL"
BASE COUNT 720 a 987 c 844 g 708 t
ORIGIN
1 tctcactagc ctcagagcac tctcagaagt tcagaaacta agaccagaaa agagaagatt
61 tttagacagc tcatgaaacg gtctgcgcgg ggcggccatt ggcggcggag tgtcacgtga
121 ccgcgggggc gtgccaatgt gcgccctcac gggtgtcaaa cccctgtcag agtgtgcgat
181 caagatcgtg aaacaacgcg atgcaaaaag cgacctacta cgacagctcg gcgatctacg
241 gtggctaccc ctaccaggca gccaacgggt tcgcttataa tgccaatcag cagccgtacc
301 cggcgtccgc cgctttgggc gccgacggcg agtaccaccg acccgcctgc tccctccagt
361 ctccctccag cgccgggggc caccccaagg cacacgaact gagtgaggcg tgcctgcgca
421 ccctgagcgc cccacctagc cagcctccaa gcctgggaga gccgcccctg cacccgccgc
481 cgccccaggc cgcgccccct gccccacagc cgcctcagcc cgcacctcag ccccctgcac
541 ctacccctgc cgcgcccccg cctccctctt ctgcctcccc tcctcagaat gccagcaaca
601 accctacccc tgccaacgcg gccaagagcc ccctgctcaa ctcacccaca gtggccaaac
661 aaatcttccc ctggatgaaa gagtctcgac aaaacacaaa gcagaaaacc agcagctcca
721 gctcaggcga aagctgcgct ggcgacaaga gcccgccggg gcaggcttcg tccaagcgcg
781 cgcgcacggc ctacacgagc gcgcagctgg tggagctgga gaaagagttc cacttcaacc
841 gctacctgtg ccggccgcgc cgggtggaga tggccaatct gctgaacctc actgagcgcc
901 agatcaagat ctggttccag aatcgccgca tgaagtacaa aaaggatcag aagggcaagg
961 gcatgctaac gtcatcgggg ggccagtctc caagtcgcag ccccgtgccc cccggagccg
1021 gtggctatct gaactctatg cattcgctgg tcaacagcgt cccgtatgag ccccagtcgc
1081 ccccgccctt ctccaagccc ccccagggta cctacgggct gccccccgcc tcctaccctg
1141 cgtccctgcc cagctgcgca cccccgccac ccccacagaa gcgctacacg gcggcagggg
1201 cgggcgcagg gggcaccccc gactatgacc cgcacgctca tggcctgcag ggcaacggca
1261 gctatgggac cccacacata cagggaagcc ccgtcttcgt ggggggcagc tatgtggagc
1321 ccatgagcaa ctccgggcca gccctctttg gtctaactca cctcccccac gctgcctcgg
1381 gcgccatgga ctatgggggt gccgggccgc tgggcagcgg ccaccaccac gggccggggc
1441 ctggggagcc gcaccccacc tacacggacc ttaccggcca ccatccttct cagggaagaa
1501 ttcaggaagc acccaagctc acccacctgt gatagtgggc ttggggctac gcgccaggag
1561 agtctccccc cacccacctt ttttctttgg ttgctttttt tttttttttt aggttcttcc
1621 tgccctttcc ttccttcctt ttctctcttc tccgccccgc actccgtttc ccggtttccc
1681 ccctcgttgg taaggcgttt ttatagttta tgtgacgtag caatcttggt tgctggaatg
1741 gctgtatcat agcgatattt atctcttcct gctcctcgat aggccactgg ccctgcaccc
1801 tttaccttct ccactctttg atcagaaaca gggtatatga acaaattttc tagtcgagtt
1861 ttcaatgtga atttgttctt acattatggc tcccgagggg aagcgattac tttttttaat
1921 tttaaatttt tttttttaat tgcacttctt gtaaagagtg agaaaaaaaa tcaaaggcgc
1981 tttgaaacag gggctctctg tgcaaggatg actaagtgta cgtctttccg tgtgtgtatg
2041 ctggtgaaca gtcagattta tttatatttt tttgcaagca ttgaataatc taagttttaa
2101 atattattta tccccatccg ttcgtattta tattaaagaa ttctgtaccc tgatggttca
2161 gaagggttct tgggcctttt gttcaattgt gtattggcgt acttagaatt ttttttattt
2221 gaaagagaaa tataattcct ttaaacggta acgatgcaat aaaaccagag aagatccagc
2281 ttttgaaaac agtgatttag gtttgtaaca tccggcaaaa ctgaaaaaaa aaatctgtaa
2341 acgcgaaaaa tactagattt gttttgagag ttcttcattc cttgctgctc acattctgag
2401 aaacaaaaag aaataaagtt tttattctga ataatatccg tgttaagaag gggttctttg
2461 gccgaagacg tgggtctgcg tggaattcag gccgaggcga gccggcagag caggccggac
2521 gcagcagccc tctggctcca gcatggggcc tggccaggct attcgcctgg aagctcggcg
2581 aattctcagg atggcggctg gggctccagg cggctgcggc agctctggta acgccgtgcg
2641 gcgggccagc tgggctgccc ggttcccagc tgctgcggag gcaggctgag ggcgcagggg
2701 ctgccgagtg ctgtgcacgg aagaaacaaa gacatcccgg cccaaggcgc agcgggagcg
2761 cacaggtgcc ccgcggccca gccgggggat aacgcagggc ggtcttctgc tccatgctct
2821 tcctcgggtc aaagcggacc aactaacgcc taaacctcgg tattagccag ccgcgcagag
2881 gatgccgagc actttccggg agcaatcgga ctcctggtct cctctgggga tgcttcgcgg
2941 tctgttatcg cgtcaggagg aaagaattgc tccaaaaatc tgcacgcgga gcgaaacagt
3001 ttgaaaggga ctgaggctca cccaggtctc cagcaaacgg aggactgaac tggggagagt
3061 caccctgagc cagcccttcc ctggactgcc ggaatcccag cattagcttc ctgctgaatg
3121 tagtatttgg cattctctga atttatttcc tctccttccc ccacccagct ttctttttat
3181 ggccccaggg ggagggggag agagcaagga gatcggtatc tttgtaataa aactgcaatt
3241 ttataaaaaa aaaaaaaaa
//