LOCUS BC015110 1825 bp mRNA linear HUM 06-MAR-2007
DEFINITION Homo sapiens hematopoietically expressed homeobox, mRNA (cDNA clone
MGC:22885 IMAGE:4048691), complete cds.
ACCESSION BC015110
VERSION BC015110.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1825)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1825)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 31 Row: o Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17978473.
FEATURES Location/Qualifiers
source 1..1825
/db_xref="H-InvDB:HIT000037010"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22885 IMAGE:4048691"
/tissue_type="Bone marrow, chronic myelogenous leukemia"
/clone_lib="NIH_MGC_54"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1825
/gene="HHEX"
/gene_synonym="HEX"
/gene_synonym="HMPH"
/gene_synonym="HOX11L-PEN"
/gene_synonym="PRH"
/db_xref="GeneID:3087"
/db_xref="HGNC:HGNC:4901"
/db_xref="MIM:604420"
CDS 37..849
/gene="HHEX"
/gene_synonym="HEX"
/gene_synonym="HMPH"
/gene_synonym="HOX11L-PEN"
/gene_synonym="PRH"
/codon_start=1
/product="hematopoietically expressed homeobox"
/protein_id="AAH15110.1"
/db_xref="GeneID:3087"
/db_xref="HGNC:HGNC:4901"
/db_xref="MIM:604420"
/translation="MQYPHPGPAAGAVGVPLYAPTPLLQPAHPTPFYIEDILGRGPAA
PTPAPTLPSPNSSFTSLVSPYRTPVYEPTPIHPAFSHHSAAALAAAYGPGGFGGPLYP
FPRTVNDYTHALLRHDPLGKPLLWSPFLQRPLHKRKGGQVRFSNDQTIELEKKFETQK
YLSPPERKRLAKMLQLSERQVKTWFQNRRAKWRRLKQENPQSNKKEELESLDSSCDQR
QDLPSEQNKGASLDSSQCSPSPASQEDLESEISEDSDQEVDIEGDKSYFNAG"
BASE COUNT 573 a 419 c 391 g 442 t
ORIGIN
1 ggggagctct gcgaggggcc ggagcgcggc ggagccatgc agtacccgca ccccgggccg
61 gcggcgggcg ccgtgggggt gccgctgtac gcgcccacgc cgctgctgca acccgcacac
121 ccgacgccct tttacatcga ggacatcctg ggccgcgggc ccgccgcgcc cacgcccgcc
181 cccacgctgc cgtcccccaa ctcctccttc accagcctcg tgtcccccta ccggaccccg
241 gtgtacgagc ccacgccgat ccatccagcc ttctcgcacc actccgccgc cgcgctggcc
301 gctgcctacg gacccggcgg cttcgggggc cctctgtacc ccttcccgcg gacggtgaac
361 gactacacgc acgccctgct ccgccacgac cccctgggca aacctctact ctggagcccc
421 ttcttgcaga ggcctctgca taaaaggaaa ggcggccagg tgagattctc caacgaccag
481 accatcgagc tggagaagaa attcgagacg cagaaatatc tctctccgcc cgagaggaag
541 cgtctggcca agatgctgca gctcagcgag agacaggtca aaacctggtt tcagaatcga
601 cgcgctaaat ggaggagact aaaacaggag aaccctcaaa gcaataaaaa agaagaactg
661 gaaagtttgg acagttcctg tgatcagagg caagatttgc ccagtgaaca gaataaaggt
721 gcttctttgg atagctctca atgttcgccc tcccctgcct cccaggaaga ccttgaatca
781 gagatttcag aggattctga tcaggaagtg gacattgagg gcgataaaag ctattttaat
841 gctggatgat gaccactggc attggcatgt tcagaaaact ggatttagga ataatgtttt
901 gctacagaaa atcttcatag aagaactgga aggctatata agaaagggaa tcaattctct
961 ggtattctgg aaacctaaaa atatttggtg cactgctcaa ttaacaaacc tacatggaga
1021 ccttaatttt gacttaacaa atagtttatg tactgctctt aggttgtttt gataaagtga
1081 cattatagtg attaaattct tcccccttta aaaaaacagt tagtggtttt cactatttat
1141 aaaaaattaa ttttgaactt tttgttaaat ttttaagtta tagctttaaa ggttttaata
1201 ggaccttctt gaacgacttt tctgtaatct gtttatctcc cacttaatgg aaaggcaaag
1261 gggtacccca aatccagagg tgcctacatt tcaggcagcc ttggagtatt ttaaaaggaa
1321 aacattcttt acttttatat gacattctta tactgctgtc tcaaatccaa aaacatttca
1381 gagctcttgt ctcagagatg tgtgttcttt ttgtcagaga tatggttgat gagaatctta
1441 aatgcttgtt ttgcactatc acttagtacc tgtttgacca aggtgttaag gggatagtac
1501 ctcccaattc aagcagagaa actgacctga ctaaagttaa tcgcagatga actagaagtc
1561 acaggttaat taaatgtaag tagattgtag atactgtttt atatcaaaca atgtttataa
1621 tgtgtatata gaattgttca ctgtaaaaaa aatggccaaa atgtgttttt tttttaataa
1681 gtaacttgac tataaaataa agccgtccgt gggacgactg acctcgtaaa aaaaaaaaaa
1741 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaa
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