LOCUS BC015090 2346 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lysyl oxidase-like 1, mRNA (cDNA clone MGC:16541
IMAGE:4040510), complete cds.
ACCESSION BC015090
VERSION BC015090.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2346)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2346)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC015090.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: n Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 67782345.
FEATURES Location/Qualifiers
source 1..2346
/db_xref="H-InvDB:HIT000036995"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16541 IMAGE:4040510"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2346
/gene="LOXL1"
/gene_synonym="LOL"
/gene_synonym="LOXL"
/db_xref="GeneID:4016"
/db_xref="HGNC:HGNC:6665"
/db_xref="MIM:153456"
CDS 306..2030
/gene="LOXL1"
/gene_synonym="LOL"
/gene_synonym="LOXL"
/codon_start=1
/product="lysyl oxidase-like 1"
/protein_id="AAH15090.1"
/db_xref="GeneID:4016"
/db_xref="HGNC:HGNC:6665"
/db_xref="MIM:153456"
/translation="MALARGSRQLGALVWGACLCVLVHGQQAQPGQGSDPARWRQLIQ
WENNGQVYSLLNSGSEYVPAGPQRSESSSRVLLAGAPQAQQRRSHGSPRRRQAPSLPL
PGRVGSDTVRGQARHPFGFGQVPDNWREVAVGDSTGMARARTSVSQQRHGGSASSVSA
SAFASTYRQQPSYPQQFPYPQAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAA
VASAGVIYPYQPRARYEEYGGGEELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSH
SLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPV
RSSDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYVQRAHLYS
LRCAAEEKCLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQ
HYHSMDEFSHYDLLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSHTQGLSPGC
YDTYNADIDCQWIDITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSA
TNCKIVQS"
BASE COUNT 424 a 836 c 728 g 358 t
ORIGIN
1 gccagccgag cggccagcca gtgcggggct ggccatgtaa ggcccacagg cggtcctgcc
61 cgcccggtgc cctgcggaga gcctcgtgca gccctgggca ccgcccctgc cctgccctga
121 ccccttggcc ttgaaatgct gtcatcggag gagccgtccc gctcgggaca aggccagcat
181 ggacaaagct agagctgggg caagcaagga gccttcctgt cctcgaggcc gtgggaagag
241 aagcacgccc agggggccac tcctgagagc ctctctgtcc accaggcctc tgcagagggg
301 tcaccatggc tctggcccga ggcagccggc agctgggggc cctggtgtgg ggcgcctgcc
361 tgtgcgtgct ggtgcacggg cagcaggcgc agcccgggca gggctcggac cccgcccgct
421 ggcggcagct gatccagtgg gagaacaacg ggcaggtgta cagcttgctc aactcgggct
481 cagagtacgt gccggccgga cctcagcgct ccgagagtag ctcccgggtg ctgctggccg
541 gcgcgcccca ggcccagcag cggcgcagcc acgggagccc ccggcgtcgg caggcgccgt
601 ccctgcccct gccggggcgc gtgggctcgg acaccgtgcg cggccaggcg cggcacccat
661 tcggctttgg ccaggtgccc gacaactggc gcgaggtggc cgtcggggac agcacgggca
721 tggcccgggc ccgcacctcc gtctcccagc aacggcacgg gggctccgcc tcctcggtct
781 cggcttcggc cttcgccagc acctaccgcc agcagccctc ctacccgcag cagttcccct
841 acccgcaggc gcccttcgtc agccagtacg agaactacga ccccgcgtcg cggacctacg
901 accagggttt cgtgtactac cggcccgcgg gcggcggcgt gggcgcgggg gcggcggccg
961 tggcctcggc gggggtcatc tacccctacc agccccgggc gcgctacgag gagtacggcg
1021 gcggcgaaga gctgcccgag tacccgcctc agggcttcta cccggccccc gagaggccct
1081 acgtgccgcc gccgccgccg ccccccgacg gcctggaccg ccgctactcg cacagtctgt
1141 acagcgaggg cacccccggc ttcgagcagg cctaccctga ccccggtccc gaggcggcgc
1201 aggcccatgg cggagaccca cgcctgggct ggtacccgcc ctacgccaac ccgccgcccg
1261 aggcgtacgg gccgccgcgc gcgctggagc cgccctacct gccggtgcgc agctccgaca
1321 cgcccccgcc gggtggggag cggaacggcg cgcagcaggg ccgcctcagc gtgggcagcg
1381 tgtaccggcc caaccagaac ggccgcggtc tccctgactt ggtcccagac cccaactatg
1441 tgcaagcatc cacttatgtg cagagagccc acctgtactc cctgcgctgt gctgcggagg
1501 agaagtgtct ggccagcaca gcctatgccc ctgaggccac cgactacgat gtgcgggtgc
1561 tactgcgctt cccccagcgc gtgaagaacc agggcacagc agacttcctc cccaaccggc
1621 cacggcacac ctgggagtgg cacagctgcc accagcatta ccacagcatg gacgagttca
1681 gccactacga cctactggat gcagccacag gcaagaaggt ggccgagggc cacaaggcca
1741 gtttctgcct ggaggacagc acctgtgact tcggcaacct caagcgctat gcatgcacct
1801 ctcataccca gggcctgagc ccaggctgct atgacaccta caatgcggac atcgactgcc
1861 agtggatcga cataaccgac gtgcagcctg ggaactacat cctcaaggtg cacgtgaacc
1921 caaagtatat tgttttggag tctgacttca ccaacaacgt ggtgagatgc aacattcact
1981 acacaggtcg ctacgtttct gcaacaaact gcaaaattgt ccaatcctga tctccgggag
2041 ggacagatgg ccaatctctc cccttccaaa gcaggccctg ctccccgggc agcctcccgc
2101 cgaggggccc agcccccaac ccacaggcag ggaggggcat ccctccctgc cggcctcagg
2161 gagcgaacgt ggatgaaaac cacagggatt ccggacgcca gaccccattt tatacttcac
2221 ttttctctac agtgttgttt tgttgttgtt ggtttttatt ttttatactt tggccatacc
2281 acagagctag attgcccagg tctgggctga ataaaacaag gtttttctaa aaaaaaaaaa
2341 aaaaaa
//