LOCUS BC015029 3876 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 30, mRNA (cDNA
clone MGC:9082 IMAGE:3911049), complete cds.
ACCESSION BC015029
VERSION BC015029.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3876)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3876)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: h Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20336289.
FEATURES Location/Qualifiers
source 1..3876
/db_xref="H-InvDB:HIT000050610"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:9082 IMAGE:3911049"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3876
/gene="DHX30"
/gene_synonym="FLJ11214"
/gene_synonym="KIAA0890"
/db_xref="GeneID:22907"
/db_xref="HGNC:HGNC:16716"
CDS 319..3786
/gene="DHX30"
/gene_synonym="FLJ11214"
/gene_synonym="KIAA0890"
/codon_start=1
/product="DEAH (Asp-Glu-Ala-His) box polypeptide 30"
/protein_id="AAH15029.1"
/db_xref="GeneID:22907"
/db_xref="HGNC:HGNC:16716"
/translation="MAASRDLLKEFPQPKNLLNSVIGRALGISHAKDKLVYVHTNGPK
KKKVTLHIKWPKSVEVEGYGSKKIDAERQAAAAACQLFKGWGLLGPRNELFDAAKYRV
LADRFGSPADSWWRPEPTMPPTSWRQLNPESIRPGGPGGLSRSLGREEEEDEEEELEE
GTIDVTDFLSMTQQDSHAPLRDSRGSSFEMTDDDSAIRALTQFPLPKNLLAKVIQIAT
SSSTAKNLMQFHTVGTKTKLSTLTLLWPCPMTFVAKGRRKAEAENKAAALACKKLKSL
GLVDRNNEPLTHAMYNLASLRELGETQRRPCTIQVPEPILRKIETFLNHYPVESSWIA
PELRLQSDDILPLGKDSGPLSDPITGKPYVPLLEAEEVRLSQSLLELWRRRGPVWQEA
PQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLERYVTEGRGARCNVIIT
QPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPSRGGALLFCTVGILLRKLQSN
PSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFSRYFGG
CPVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHID
ARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQPP
VGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQR
RGRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKIHMPEKTAVEFLS
KAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRC
LHPLLVVVSCLTRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRAVAGWEEVLRWQ
DRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEAFLVGKPSDCTLASAQCNEYSEE
EELVKGVLMAGLYPNLIQVRQGKVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRL
RSRWLTYFMAVKSNGSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLR
LEGDSRTVRLLKELRRALGRMVERSLRSELAALPPSVQEEHGQLLALLAELLRGPCGS
FDVRKTADD"
BASE COUNT 869 a 1132 c 1132 g 743 t
ORIGIN
1 cgcggctcat gcgcggtgca cagaggcttg tttcacatct gtaacaacag gaggaggccc
61 agcctcgtga tgaggaatag caaggagaga attcagctcc agttcaaaag cctacaaaat
121 ctgagactgt cattgctttt ataaggattc cagctttccc tcctggccag aaatgttcag
181 cctggactca ttcagaaaag atcgggccca gcacaggcag cgtcagtgca aacttccccc
241 accccgcctt ccacccatgt gtgtcaaccc taccccagga gggaccatct ctcgaggctg
301 aacgttaaca tttccaacat ggcagcttct agggacctat taaaagagtt cccacagccc
361 aaaaatcttc tcaacagtgt gattggaaga gccctcggca tctcacatgc aaaagacaaa
421 ctagtctacg tgcacacaaa tggaccgaag aaaaagaaag tcacactgca cataaaatgg
481 cccaagagcg tggaggtaga aggctatggc agcaagaaga tcgatgctga gcggcaggct
541 gcagctgcag cctgccagct gttcaagggt tggggtctgc taggtccccg gaatgagttg
601 tttgacgcag ccaaataccg agtgctagct gatcgctttg gctcccctgc cgacagctgg
661 tggcgtccgg aacccaccat gccccctact tcctggcggc agctgaatcc agagagtatt
721 cgaccagggg gacctggggg cctatcccgc tctttaggcc gggaagaaga ggaggacgag
781 gaggaagagc tagaagaagg gaccatagat gttaccgact tcttgtccat gacccagcag
841 gattcccacg ctccactcag ggactcaagg gggagttcct ttgagatgac agatgacgac
901 agtgccatta gggctctgac ccagtttcca cttcccaaga accttctggc caaggtgatt
961 cagattgcaa cgtcatcctc cacagctaag aacctcatgc agttccatac tgtgggcacc
1021 aagaccaagc tgtctacact caccctgctc tggccctgcc ccatgacctt tgttgccaaa
1081 gggcgccgca aagcagaggc tgagaataag gcggcagcct tggcctgcaa gaaactgaag
1141 agcctgggcc tggtggacag gaacaacgaa ccgcttacac acgccatgta taacctggcc
1201 tctttgcgtg agctgggtga gacccagcgc cgaccatgca ccatccaggt gcccgagccc
1261 atcctccgca agatagagac cttcctgaac cattaccctg tggagagttc atggatcgcc
1321 ccagaactcc ggctgcagag tgatgacatc ttgcccttgg gcaaggactc agggcctctg
1381 agtgacccta tcacaggcaa gccctatgtg cccctgttgg aagcagagga ggtacgtctc
1441 agccagagtc tgctagaact gtggcggcgg cgagggccgg tctggcagga ggccccccag
1501 ctacctgtgg acccacatcg ggacaccatc ctcaacgcca ttgagcagca cccggtggtg
1561 gtcatctctg gggacacggg ctgtgggaag accacgcgca tcccccagct gttgctggag
1621 cgctatgtga ccgagggccg aggtgcccgc tgcaatgtta tcatcaccca acctcgccgc
1681 atctctgctg tgtctgtggc acagcgggtc agccacgaac tgggcccctc cctgcgccgg
1741 aatgtgggct tccaggtgcg gttggaaagt aagcccccat cccgaggcgg ggccctgctc
1801 ttctgcactg tgggtatcct gctgcgtaag ctgcagagca accccagcct ggagggcgtg
1861 agccacgtca tcgtggatga ggtgcatgag cgggacgtga acacagactt tctgctgatc
1921 ctgctcaagg gcctgcagcg gctcaacccg gccctgcggc tggtgctcat gagtgccaca
1981 ggggacaatg agcgcttctc ccgatacttt ggtggctgcc ccgtcatcaa ggtgcctggc
2041 ttcatgtacc cagtcaagga gcactaccta gaggacatcc tggccaagtt gggcaagcac
2101 cagtacctgc accggcaccg gcaccatgag tctgaggatg aatgcgcact cgatttggac
2161 cttgtgactg atctggttct gcacatcgat gctcgcgggg aaccaggtgg gatcctgtgc
2221 ttcctgcctg ggtggcagga gatcaaagga gtgcagcagc gcctccagga ggccctgggc
2281 atgcacgaga gcaagtacct catcctgcca gtgcactcca acatccccat gatggatcag
2341 aaggccatat tccagcagcc tccagttggg gtgcgcaaga ttgtcttggc caccaacatt
2401 gctgagactt ccatcacaat caatgacatc gtgcatgtgg tggacagtgg gctgcacaag
2461 gaagaacgct atgacctgaa gaccaaggtg tcctgcctgg agacagtgtg ggtatcaaga
2521 gccaatgtga tccagcgccg gggccgggcg ggccgctgcc agtccggctt tgcctaccac
2581 ttgttccctc gaagccggct ggagaaaatg gtccctttcc aagtgccaga gatcctgcgc
2641 acacctcttg agaacctggt gctgcaagcg aaaatccaca tgcctgagaa gacggcggtg
2701 gagttcctgt ccaaggctgt ggacagtcca aacatcaagg cagtggacga ggctgtgatc
2761 ttgctccagg agatcggggt gctggaccag cgggagtacc tgactaccct ggggcagcgc
2821 ctggctcaca tctccaccga cccccggttg gccaaggcca ttgtgttggc tgccatcttc
2881 cgttgcctgc acccactact ggtggtcgtt tcctgcctca cccgggaccc cttcagcagc
2941 agcctacaga accgggcaga ggtggacaag gtgaaagcac tgttgagcca tgacagcggc
3001 agtgaccacc tggcctttgt gcgggctgtc gccggctggg aggaggtgct gcgttggcag
3061 gaccgcagct cccgggagaa ttacctggag gaaaacctgc tgtacgcacc cagcctgcgc
3121 ttcatccacg gactcatcaa gcagttctca gagaacattt atgaggcctt cctggtgggg
3181 aagccctcgg actgcaccct ggcctccgcc cagtgcaacg agtacagtga ggaggaggag
3241 ctggtgaagg gcgtgctgat ggccggcctc taccccaacc tcatccaggt gaggcagggc
3301 aaggtcaccc ggcaggggaa gttcaagccc aacagcgtca catataggac caaatcaggc
3361 aacatcctgc tgcacaagtc gaccattaac agggaggcca cacggttacg gagccgatgg
3421 ctgacgtatt tcatggcagt caagtccaat ggcagcgtct tcgtccggga ctcctctcag
3481 gtgcacccgc tagctgtgct gctgctgacc gacggggacg tgcacatccg tgatgacggg
3541 cgccgggcca ccatctcact gagcgacagt gacctgctgc ggctggaggg tgactcgcgt
3601 accgtgcggc tgctgaagga gctgcggcgg gccctgggcc gcatggtgga gcggagcctg
3661 cgcagcgagc tggctgcact tccccccagc gtacaggagg agcacgggca gctgcttgcg
3721 ctactggcag agctgctgcg aggaccctgt ggcagctttg atgtgcgcaa gacagctgac
3781 gactgagccc tgcttctgct ggggctgtgt acagagtgca aatgtttatt taaaataaag
3841 ttctatttat cccttgtgaa aaaaaaaaaa aaaaaa
//