LOCUS BC015026 3182 bp mRNA linear HUM 19-JAN-2018
DEFINITION Homo sapiens Josephin domain containing 1, mRNA (cDNA clone
MGC:8997 IMAGE:3921785), complete cds.
ACCESSION BC015026
VERSION BC015026.3
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3182)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3182)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 3182)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2018) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Jan 19, 2018 this sequence version replaced BC015026.2.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: o Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222319.
FEATURES Location/Qualifiers
source 1..3182
/db_xref="H-InvDB:HIT000036968"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8997 IMAGE:3921785"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3182
/gene="JOSD1"
/gene_synonym="dJ508I15.2"
/gene_synonym="KIAA0063"
/db_xref="GeneID:9929"
/db_xref="HGNC:HGNC:28953"
CDS 277..885
/gene="JOSD1"
/gene_synonym="dJ508I15.2"
/gene_synonym="KIAA0063"
/codon_start=1
/product="Josephin domain containing 1"
/protein_id="AAH15026.1"
/db_xref="GeneID:9929"
/db_xref="HGNC:HGNC:28953"
/translation="MSCVPWKGDKAKSESLELPQAAPPQIYHEKQRRELCALHALNNV
FQDSNAFTRDTLQEIFQRLSPNTMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWD
KRRDVGVIALTNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMP
EWIGGESELRKFLKHHLRGKNCELLLVVPEEVEAHQSWRTDV"
BASE COUNT 808 a 772 c 772 g 830 t
ORIGIN
1 ttacatttta tgtgtttttt taaattctgc actttgacag tggtagcaaa ataaaagtaa
61 tccaaaagtt atttttctat tgagaagaga gaagaggtgg gttttatttt tttccttttg
121 attccaatct tttctcccag tgacaaagca taaatcatgg acaccagaga ataaggtgga
181 cctcaggaat ccggaaaaga ctgagaagct tacattcttc ctctagaggg aagagtgggg
241 tgtttatagc catctctgga acctaaaaca aaaaacatga gttgtgtgcc atggaaagga
301 gacaaggcca aatctgaatc attggagctg ccccaggcag cacccccaca aatctaccat
361 gagaaacagc gcagggagct ttgtgccctc cacgccctca ataacgtctt ccaggacagc
421 aatgccttca cccgggatac gctgcaagag attttccaga ggttgtctcc aaacaccatg
481 gtgacacctc acaagaagag catgctggga aatggcaact acgatgtgaa tgtcattatg
541 gcagcacttc agaccaaagg ctatgaagct gtttggtggg acaagcgcag ggatgtcggt
601 gtcattgccc tcactaacgt catgggcttc atcatgaatc tgccctccag cctatgctgg
661 ggtccactga aactgcccct caaaaggcag cactggatct gtgttcgaga ggtgggaggg
721 gcctactaca acctcgactc caaactcaag atgcccgagt ggattggagg cgagagcgag
781 ctcaggaagt ttctaaaaca tcatttgcga ggaaagaact gtgaactcct gctggtggta
841 ccagaagagg tagaggctca tcagagttgg aggaccgatg tgtaacagtt ctgcccaacc
901 tccctctcgc ctcagcccct tcagtcctct gtgacgtgct gtggcctcta cagtgggtct
961 gcccttgcca cttccccaaa catctcatca agtttttccc cttcagatct gacagtgcaa
1021 taggacagac gtgtggactg ttataagaac tactcagtgt tttgttcctg ggcaaggaag
1081 gtaggagttc tgtgcactta aggccagtgg tcacaaaccc ttgttttatt taagagacag
1141 aggagaaagt ggagcgggga gggaatccta gcttattttc ccttttctat gaggacttga
1201 cacaggttct gctgagttgt cactgctgct ccagactcac ctagagatgc tgcctccact
1261 ttccatcctg tctgggtctg aaaacagtgg gtctgcagat agtgcccaca aaccccatgt
1321 gactggtttg aaggacccag agcataaagg tctctcagga aaccatgtcc aaaaccctag
1381 cagcggtaca gcatgctgtc tccaaccctt atccccaggt ttaagggtgg tttatggcca
1441 tacgtggagg ttttttgttg ttgtttttga gactgagttt cactcttgtt gcccaggctg
1501 gagtgcaatg gcaccatctc ggctcactgc aacctccacc tcctggttca agcgattctc
1561 aggcctcagc ttcccaagta gttgggatta caggcgcctg ccaccacacc tggctaattt
1621 tgtattttta gtagagatgg ggtttctcca tgttggtcag gctggtctca aactcccgac
1681 ctcaagtgat ctgcccgcct tggcctccca aagtgctggg attacaggcg tgagccaccg
1741 cacccggcag agttttataa tgaaaaatta actaatattc tagtatgaag tgaggaggat
1801 actgaacagg atgtggctaa agccaacctg ggacagccat ggggtggctt ggtttcttca
1861 ctccagtgtt gtccctacca tttcgcagca ttgatttagg aggctctggg acaaaagaga
1921 agccaaagag cagttttccc agttcactca ctctggcaaa atcaggaaaa aaaagtctgc
1981 ttttgacatc aaattccact aatttggggc agcgttgggt gaggaaagta ttgtgaagac
2041 aggcttcttg gagtaggggc agccacaatt cagtagacac tctaggctcg gaggctgcca
2101 ctgtagttgc caagctcagg ttgggtggtt ctgtgctgta tggatggaat aggacctggg
2161 ctggtcatct tcatgtcgtt tcctctctgt atcaatggaa gttcaacccg cccctacctc
2221 ttcagatagt tgtaggccac ttttctcttg taactttgga aaacaaaaga ggagaaataa
2281 gtatcatacc atatgcgtgt ctccaaagtg gatgtggttg cctcaaggca ggtggcaggc
2341 aggggtgacc tgctggccct cagatcaatg gtcgtggcag gtctgagagc tgtcccactg
2401 gccagacttc tctccagcag caaagccagc ctggggcttg catgttgatc ctgagcaagc
2461 ttaacggggt gaagctgggc tttctccccc ctgtgactgg agtgcatgtt gacaccagca
2521 ctttttctgc acatgtatct tcaatccaac aaggccgttt ttttaatgct gagtaacagg
2581 ccaccaagcg gctactgcgt tatatcttct cagcaactgg ccgcagtctc ttctgcacca
2641 ttttctacac cagacctgct tggcaccaca gggagctctt ttcctgccct gcacaatgac
2701 attccaacca ccaccagcca gacattacag ccaaccttgc tgattgtcac aagcaggacc
2761 ttggggccac tggcactgtc agatagtaag ccatttcttg ggtagaggag gaaactcctc
2821 tccacaaatc cacttgggcc tgtgcaaatg gcacttgaaa gagtccccat gcacttggag
2881 tccatgagcc aatgggatat gcaaagacgc ttaaacattt cagggctggt ttctctgttc
2941 atatccaatt ctggtgctta ggaacaggga cccatgctga tgcccaaggg caaaaagccc
3001 cacttccttt aaggaagtga acaggcctga ccctgatgcc caataacggg caaccctagg
3061 ctttttgttt ttcttgcttt tattcctttt tgttgttggc cttgtgctgc gtttgtttac
3121 aaaagatgta ttttgtttaa ccaaatatta aaaatggaaa actccaaaaa aaaaaaaaaa
3181 aa
//