LOCUS BC015014 2809 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens RAB18, member RAS oncogene family, mRNA (cDNA clone
MGC:8766 IMAGE:3922029), complete cds.
ACCESSION BC015014
VERSION BC015014.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2809)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2809)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC015014.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: o Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34222129.
FEATURES Location/Qualifiers
source 1..2809
/db_xref="H-InvDB:HIT000036960"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8766 IMAGE:3922029"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2809
/gene="RAB18"
/gene_synonym="RAB18LI1"
/db_xref="GeneID:22931"
/db_xref="HGNC:HGNC:14244"
/db_xref="MIM:602207"
CDS 51..671
/gene="RAB18"
/gene_synonym="RAB18LI1"
/codon_start=1
/product="RAB18, member RAS oncogene family"
/protein_id="AAH15014.1"
/db_xref="GeneID:22931"
/db_xref="HGNC:HGNC:14244"
/db_xref="MIM:602207"
/translation="MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVD
FKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNW
LNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQC
AFEELVEKIIQTPGLWESENQNKGVKLSHREEGQGGGACGGYCSVL"
BASE COUNT 866 a 428 c 540 g 975 t
ORIGIN
1 gagaggcgca cccgggcggc cagctgggct cggagcggaa cggggtcagg atggacgagg
61 acgtgctaac caccctgaag atcctcatca tcggcgagag tggggtgggc aagtccagcc
121 tgctcttgag gttcacagat gatacgtttg atccagaact tgcagcaaca ataggtgttg
181 actttaaggt gaaaacaatt tcagtggatg gaaataaggc taaacttgca atatgggata
241 ctgctggtca agagaggttt agaacattaa ctcccagcta ttatagaggt gcacagggtg
301 ttatattagt ttatgatgtc acaagaagag atacatttgt taaactggat aattggttaa
361 atgaattgga aacatactgt acaagaaatg acatagtaaa catgctagtt ggaaataaaa
421 tcgataagga aaatcgtgaa gtcgatagaa atgaaggcct gaaatttgca cgaaagcatt
481 ccatgttatt tatagaggca agtgcaaaaa cctgtgatgg tgtacaatgt gcctttgaag
541 aacttgttga aaagatcatt cagacccctg gactgtggga aagtgagaac cagaataaag
601 gagtcaaact gtcacacagg gaagaaggcc aaggaggagg agcctgtggt ggttattgct
661 ctgtgttata aactctggga aattccatct cttgcatatt tgatcagata gtgacatctt
721 tctgtatata aactctttaa ctgctatttt agggaccttg cagtttgcac ataattgttt
781 tatatcatag cagtaaatat ttgcaagaaa tcccactcat cgaccccggg taaaatgtta
841 tggtaagcat gcacagtttg cagtctacag tttttttatg tagcacaaaa taggtgtacc
901 tttataagta cattcaattt tatgatttac atttatcatg taatttttaa aaaaatccat
961 ctatctagga tatgttgata caaagtctgc ttttgctatt ctttttgctt aaatactcct
1021 atcattttct gaattacttg gtatttagaa ctcctagcac cacggggaag aatagaggta
1081 tcatcaaacg tggcaaattt tctttcagga ataataaaga gcatgattcc acagcttttc
1141 tgggatgttt gagattcttt tttagtacta agcaaaattc tcatcacaga atgtagccca
1201 ggccaattta taactaaatc tctatttgtt cggatgatgc ttctaaaaca gcattgatag
1261 gttaaagaag cttggtattt ttaatttact tcaatgatta gctcagttgc ttaactggag
1321 ttttaatcct gtgatatgta cattggattc atgactgtgc agcattttta gttatgtggt
1381 gtttggcaga atgacaataa ggttttcccc cattttggtt tcaggaggac atgaatagtg
1441 tgtttattgt aactcctcat acacttttaa aaccaacatc ttttttcata aatgttggta
1501 gtgtttgtcc aggtacctta actgtagctt gtgtaatgtt gatgaatatc tgtatcttac
1561 ggcttccata atggctagtt gatattcaaa aacctatttc tgtgttttga ggggtgggga
1621 aaaaaaacac taagtgataa tttgaaaaag gcatattgct tccagattct gatgtgtgag
1681 ggaaaatact gtcacaatga aaatcttgac aatttactta acaagtaacc agtagttcat
1741 caaaaccaac ttgtacagac taataaatct ttttcacagt attcagtttt ctcacctctt
1801 gctattgtat attgtagatt tttttcattc atgtgttatt taatttacac tgatctctgc
1861 tattttaacc ccccaaataa gttatttgtc ctttaaggtt ggttactata atacccctca
1921 gtaagattcc agtattaatt tctgggcagt ttgttctctg tatacaattg caaatgataa
1981 gcatttttgt gagtgaccac ctttgcaata tgtttgttaa tttacttcat gttgggttct
2041 ttctgaaatg tacatcttta catataaaaa cctcacattc tacttgattt acacttccta
2101 gtctacatta catgtggttg aaggttttat acattctata tgcttttact aaatatacaa
2161 gatttactac tagaaatttg gagaaagaac actaacacat gtacttgtga tttgttcatg
2221 ttatattaaa acttgagatt tgtgtattta tgtagagtct gtattgacaa gactgttgtt
2281 ttttgctcct tgagctatat aataatctgt gtattggatt gttgtcttga tttggtctaa
2341 atttgaatat atatgagtta cttgaatata acaaaaatga attttgtttg atagatttat
2401 attgtaacct ttttctagtt cttgaataaa tatagcctgc tttccctaga tgcatttgtg
2461 taggaagtat atacatttcc ctattactct catcagctga agaatatgta ctattgtgtt
2521 actcaaatta tgtggctttc attttgttgt tttgttgcaa gcttagtgtt ttgtagtgga
2581 ggttttgtaa atgaaacagt tgtaatatct aaggtcaggc acctagtaac agggttttgt
2641 taattctttt cagaatcatt gaagcagtct taaagggtct tttgcagatg gtacaaatta
2701 gaacaattag aatatagtat tttgagttct agtagtactg agattgaccc aaacaaataa
2761 aaaactattc aatttctgag taatagttaa aaaaaaaaaa aaaaaaaaa
//