LOCUS BC015006 1868 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens calcium binding protein 1, mRNA (cDNA clone
IMAGE:4857304), with apparent retained intron.
ACCESSION BC015006
VERSION BC015006.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1868)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1868)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: e Column: 12
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1868
/db_xref="H-InvDB:HIT000050607"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4857304"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 416 a 527 c 561 g 364 t
ORIGIN
1 ggtgggtgcc tgtagaccaa gctgctcagg aggctgaggc aggagaatca cttgaatccg
61 ggagtcagag gttgcagtga gccaagatca cgccactgca ctccagcctg ggcgacagag
121 tgcactagcc acacacaaaa aaggaggggg catgtttcca ctttgcccca gtccccacct
181 ctcacaccct gcctgcttcg tttatgtcag caatggcacc tgcatgtgca acctctggtc
241 tggcagacca gccaagcctg gtctccatgc tgccagctcc gattgccctc actgccttcc
301 agcggggatc tggctggggt aggacaagtc tgtttgggag ctgggaggaa tgacttagcc
361 ctggagattg actgaattgg gaggttggga gcattttggg aaaggatgtt gtctcattag
421 gctctgagtg aacacttccc attggtgaga atagaagccc cccgctgccc ctgtctcttc
481 atgcacttgg gtgtgtgatt ctgtgcatat gtatgtgcca gtgcgtgcgt gtgtgtgtgt
541 gtgtgtgcgc atgtgccaca cagagggcat cacattcagc tctccccgga accaccattt
601 ccgtcaagga ttggagactc tgtctgttgg accaatttga tgcctgtgca cgctcagggc
661 tctctgaacc ccgctccttg actctcaggg tcccctcttg cggaaagccc ctcccgggac
721 caggagccag gctgggcagg gaggtgacac cctgcctctc ttttgcattt gcttggtgct
781 ggctgaagat gtgccaggag gaacagacca gctacatggt ggtgcagacg agcgaggagg
841 ggctggcggc tgacgccgag ctcccgggac cgctcctgat gctggcccag aactgcgcag
901 tcatgcacaa cctgctgggc cctgcctgca ttttcctgcg caagggcttc gctgagaaca
961 ggcagcctga tagatcactg cgaccagagg aaattgaaga gctccgagag gccttcagag
1021 aattcgacaa ggacaaggat ggctacatca actgccggga tctgggcaac tgcatgcgca
1081 ccatgggcta catgcccacc gagatggagc tcatcgaact gtcccagcag atcaacatga
1141 acctgggtgg ccatgtagat tttgatgact tcgtggagct aatggggcct aaactcctgg
1201 cagagacagc agatatgatt ggtgtaaagg aactgcgaga tgctttccga gagtttgaca
1261 ccaatggtga tggggaaata agcaccagtg agctgcgaga ggctatgagg aagctcctgg
1321 gtcatcaggt gggacaccga gacatagagg aaattatccg agatgtggac ctcaatgggg
1381 atggacgagt ggactttgaa gagtttgtcc ggatgatgtc ccgctgaggc cgcgagggcc
1441 cctccaggac tgccaagctc ccaaaggcgg ggctaagagg agctagagct tgcctcaccc
1501 gctgtagccg ccgagagccc aggatgtact ggcggatggg gcctgcctgc accccgggga
1561 ggcgcccacc ccggaccccc acccctccgc actgtgaaag actaactcct gcaactggaa
1621 agcgggggcg cccgccgacg aggaggccac cgtgccaagc cggcagaggt catgccaggc
1681 gccaagggcc atgtgcccag ctgctgctgg ctgggtgggc cagggagccc gccagcagac
1741 cccacacagc atgtccgccc cagggcaaag cctcccacct tcgctctgcg cccgtcccag
1801 ctcgcctcag ccctgttatc tcagaaccaa taaaaatatt tccaagagca aaaaaaaaaa
1861 aaaaaaaa
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