LOCUS BC015003 1929 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens phospholipase D family, member 4, mRNA (cDNA clone
MGC:23565 IMAGE:4853026), complete cds.
ACCESSION BC015003
VERSION BC015003.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1929)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1929)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20270334.
FEATURES Location/Qualifiers
source 1..1929
/db_xref="H-InvDB:HIT000036954"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23565 IMAGE:4853026"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1929
/gene="PLD4"
/db_xref="GeneID:122618"
/db_xref="HGNC:HGNC:23792"
CDS 105..1625
/gene="PLD4"
/codon_start=1
/product="phospholipase D family, member 4"
/protein_id="AAH15003.2"
/db_xref="GeneID:122618"
/db_xref="HGNC:HGNC:23792"
/translation="MLKPLWKAAVAPTWPCSMPPRRPWDREAGTLQVLGALAVLWLGS
VALICLLWQVPRPPTWGQVQPKDVPRSWEHGSSPAWEPLEAEARQQRDSCQLVLVESI
PQDLPSAAGSPSAQPLGQAWLQLLDTAQESVHVASYYWSLTGPDIGVNDSSSQLGEAL
LQKLQQLLGRNISLAVATSSPTLARTSTDLQVLAARGAHVRQVPMGRLTRGVLHSKFW
VVDGRHIYMGSANMDWRSLTQVKELGAVIYNCSHLAQDLEKTFQTYWVLGVPKAVLPK
TWPQNFSSHFNRFQPFHGLFDGVPTTAYFSASPPALCPQGRTRDLEALLAVMGSAQEF
IYASVMEYFPTTRFSHPPRYWPVLDNALRAAAFGKGVRVRLLVGCGLNTDPTMFPYLR
SLQALSNPAANVSVDVKVFIVPVGNHSNIPFSRVNHSKFMVTEKAAYIGTSNWSEDYF
SSTAGVGLVVTQSPGAQPAGATVQEQLRQLFERDWSSRYAVGLDGQAPGQDCVWQG"
BASE COUNT 352 a 660 c 584 g 333 t
ORIGIN
1 ggaggttggt gtggagcaca ggcagcaccg agcctgcccc gtgagctgag ggcctgcagt
61 ctgcggctgg aatcaggata gacaccaagg caggaccccc agagatgctg aagcctcttt
121 ggaaagcagc agtggccccc acatggccat gctccatgcc gccccgccgc ccgtgggaca
181 gagaggctgg cacgttgcag gtcctgggag cgctggctgt gctgtggctg ggctccgtgg
241 ctcttatctg cctcctgtgg caagtgcccc gtcctcccac ctggggccag gtgcagccca
301 aggacgtgcc caggtcctgg gagcatggct ccagcccagc ttgggagccc ctggaagcag
361 aggccaggca gcagagggac tcctgccagc ttgtccttgt ggaaagcatc ccccaggacc
421 tgccatctgc agccggcagc ccctctgccc agcctctggg ccaggcctgg ctgcagctgc
481 tggacactgc ccaggagagc gtccacgtgg cttcatacta ctggtccctc acagggcctg
541 acatcggggt caacgactcg tcttcccagc tgggagaggc tcttctgcag aagctgcagc
601 agctgctggg caggaacatt tccctggctg tggccaccag cagcccgaca ctggccagga
661 catccaccga cctgcaggtt ctggctgccc gaggtgccca tgtacgacag gtgcccatgg
721 ggcggctcac caggggtgtt ttgcactcca aattctgggt tgtggatgga cggcacatat
781 acatgggcag tgccaacatg gactggcggt ctctgacgca ggtgaaggag cttggcgctg
841 tcatctataa ctgcagccac ctggcccaag acctggagaa gaccttccag acctactggg
901 tactgggggt gcccaaggct gtcctcccca aaacctggcc tcagaacttc tcatctcact
961 tcaaccgttt ccagcccttc cacggcctct ttgatggggt gcccaccact gcctacttct
1021 cagcgtcgcc accagcactc tgtccccagg gccgcacccg ggacctggag gcgctgctgg
1081 cggtgatggg gagcgcccag gagttcatct atgcctccgt gatggagtat ttccccacca
1141 cgcgcttcag ccaccccccg aggtactggc cggtgctgga caacgcgctg cgggcggcag
1201 ccttcggcaa gggcgtgcgc gtgcgcctgc tggtcggctg cggactcaac acggacccca
1261 ccatgttccc ctacctgcgg tccctgcagg cgctcagcaa ccccgcggcc aacgtctctg
1321 tggacgtgaa agtcttcatc gtgccggtgg ggaaccattc caacatccca ttcagcaggg
1381 tgaaccacag caagttcatg gtcacggaga aggcagccta cataggcacc tccaactggt
1441 cggaggatta cttcagcagc acggcggggg tgggcttggt ggtcacccag agccctggcg
1501 cgcagcccgc gggggccacg gtgcaggagc agctgcggca gctctttgag cgggactgga
1561 gttcgcgcta cgccgtcggc ctggacggac aggctccggg ccaggactgc gtttggcagg
1621 gctgaggggg gcctcttttt ctctcggcga ccccgccccg cacgcgccct cccctctgac
1681 cccggcctgg gcttcagccg cttcctcccg caagcagccc gggtccgcac tgcgccagga
1741 gccgcctgcg accgcccggg cgtcgcaaac cgcccgcctg ctctctgatt tccgagtcca
1801 gccccccctg agccccacct cctccaggga gccctccagg aagccccttc cctgactcct
1861 ggcccacagg ccaggcctaa aaaaaactcg tggcttcaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaa
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