LOCUS BC014990 1262 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens stomatin (EPB72)-like 2, mRNA (cDNA clone MGC:23225
IMAGE:4907745), complete cds.
ACCESSION BC014990
VERSION BC014990.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1262)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1262)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: p Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1262
/db_xref="H-InvDB:HIT000036949"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23225 IMAGE:4907745"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1262
/gene="STOML2"
/gene_synonym="HSPC108"
/gene_synonym="SLP-2"
/db_xref="GeneID:30968"
/db_xref="HGNC:HGNC:14559"
/db_xref="MIM:608292"
CDS 33..1103
/gene="STOML2"
/gene_synonym="HSPC108"
/gene_synonym="SLP-2"
/codon_start=1
/product="stomatin (EPB72)-like 2"
/protein_id="AAH14990.1"
/db_xref="GeneID:30968"
/db_xref="HGNC:HGNC:14559"
/db_xref="MIM:608292"
/translation="MLARAARGTGALLLRGSLLASGRAPRRASSGLPRNTVVLFVPQQ
EAWVVERMGRFHRILEPGLNILIPVLDRIRYVQSLKEIVINVPEQSAVTLDNVTLQID
GVLYLRIMDPYKASYGVEDPEYAVTQLAQTTMRSELGKLSLDKVFRERESLNASIVDA
INQAADCWGIRCLRYEIKDIHVPPRVKESMQMQVEAERRKRATVLESEGTRESAINVA
EGKKQAQILASEAEKAEQINQAAGEASAVLAKAKAKAEAIRILAAALTQHNGDAAASL
TVAEQYVSAFSKLAKDSNTILLPSNPGDVTSMVAQAMGVYGALTKAPVPGTPDSLSSG
SSRDVQGTDASLDEELDRVKMS"
BASE COUNT 305 a 326 c 367 g 264 t
ORIGIN
1 gttggttccg gaggtcgctg cggcggtggg aaatgctggc gcgcgcggcg cggggcactg
61 gggccctttt gctgaggggc tctctactgg cttctggccg cgctccgcgc cgcgcctcct
121 ctggattgcc ccgaaacacc gtggtactgt tcgtgccgca gcaggaggcc tgggtggtgg
181 agcgaatggg ccgattccac cggatcctgg agcctggttt gaacatcctc atccctgtgt
241 tagaccggat ccgatatgtg cagagtctca aggaaattgt catcaacgtg cctgagcagt
301 cggctgtgac tctcgacaat gtaactctgc aaatcgatgg agtcctttac ctgcgcatca
361 tggaccctta caaggcaagc tacggtgtgg aggaccctga gtatgccgtc acccagctag
421 ctcaaacaac catgagatca gagctcggca aactctctct ggacaaagtc ttccgggaac
481 gggagtccct gaatgccagc attgtggatg ccatcaacca agctgctgac tgctggggta
541 tccgctgcct ccgttatgag atcaaggata tccatgtgcc accccgggtg aaagagtcta
601 tgcagatgca ggtggaggca gagcggcgga aacgggccac agttctagag tctgagggga
661 cccgagagtc ggccatcaat gtggcagaag ggaagaaaca ggcccagatc ctggcctccg
721 aagcagaaaa ggctgaacag ataaatcagg cagcaggaga ggccagtgca gttctggcga
781 aggccaaggc taaagctgaa gctattcgaa tcctggctgc agctctgaca caacataatg
841 gagatgcagc agcttcactg actgtggccg agcagtatgt cagcgcgttc tccaaactgg
901 ccaaggactc caacactatc ctactgccct ccaaccctgg cgatgtcacc agcatggtgg
961 ctcaggccat gggtgtatat ggagccctca ccaaagcccc agtgccaggg actccagact
1021 cactctccag tgggagcagc agagatgtcc agggtacaga tgcaagtctt gatgaggaac
1081 ttgatcgagt caagatgagt tagtggagct gggcttggcc agggagtctg gggacaagga
1141 agcagatttt cctgattctg gctctagctt ccctgccaag attttggttt ttattttttt
1201 atttgaactt tagtcgtgta ataaactcac cagtggcaaa ccaaaaaaaa aaaaaaaaaa
1261 aa
//