LOCUS BC014974 956 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens Yip1 interacting factor homolog B (S. cerevisiae),
mRNA (cDNA clone MGC:23132 IMAGE:4865479), complete cds.
ACCESSION BC014974
VERSION BC014974.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 956)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 956)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: i Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24308363.
FEATURES Location/Qualifiers
source 1..956
/db_xref="H-InvDB:HIT000036935"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23132 IMAGE:4865479"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..956
/gene="YIF1B"
/gene_synonym="FinGER8"
/db_xref="GeneID:90522"
/db_xref="HGNC:HGNC:30511"
CDS 4..888
/gene="YIF1B"
/gene_synonym="FinGER8"
/codon_start=1
/product="YIF1B protein"
/protein_id="AAH14974.1"
/db_xref="GeneID:90522"
/db_xref="HGNC:HGNC:30511"
/translation="MHPAGLAAAAAGTPRLPSKRRIPVSQPGMADPHQLFDDTSSAQS
RGYGAQRAPGGLSYPAASPTPHAAFLADPVSNMAMAYGSSLAAQGKELVDKNIDRFIP
ITKLKYYFAVDTMYVGRKLGLLFFPYLHQDWEVQYQQDTPVAPRFDVNAPDLYIPAMA
FITYVLVAGLALGTQDRFSPDLLGLQASSALAWLTLEVLAILLSLYLVTVNTDLTTID
LVAFLGYKYVGMIGGVLMGLLFGKIGYYLVLGWCCVAIFVFMFPLLPGAVAHACNPST
LGGRGGRITRSGDQDHPG"
BASE COUNT 203 a 292 c 267 g 194 t
ORIGIN
1 aggatgcacc cggcaggctt ggcggcggcg gctgcgggga cgccccggct gccctcgaag
61 cggaggatcc ctgtgtccca gccgggcatg gccgaccccc accagctttt cgatgacaca
121 agttcagccc agagccgggg ctatggggcc cagcgggcac ctggtggcct gagttatcct
181 gcagcctctc ccacgcccca tgcagccttc ctggctgacc cggtgtccaa catggccatg
241 gcctatggga gcagcctggc cgcgcagggc aaggagctgg tggataagaa catcgaccgc
301 ttcatcccca tcaccaagct caagtattac tttgctgtgg acaccatgta tgtgggcaga
361 aagctgggcc tgctgttctt cccctaccta caccaggact gggaagtgca gtaccaacag
421 gacaccccgg tggccccccg ctttgacgtc aatgccccgg acctctacat tccagcaatg
481 gctttcatca cctacgtttt ggtggctggt cttgcgctgg ggacccagga taggttctcc
541 ccagacctcc tggggctgca agcgagctca gccctggcct ggctgaccct ggaggtgctg
601 gccatcctgc tcagcctcta tctggtcact gtcaacaccg acctcaccac catcgacctg
661 gtggccttct tgggctacaa atatgtcggg atgattggcg gggtcctcat gggcctgctc
721 ttcgggaaga ttggctacta cctggtgctg ggctggtgct gcgtagccat ctttgtgttc
781 atgtttcccc ttttgccggg cgcggtggct catgcttgta atcccagcac tttgggaggc
841 cgaggcggtc ggatcacgag gtcaggagat caagaccatc ctggctaaca cggtgaaacc
901 ccatctctac taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//