LOCUS BC014960 2940 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens component of oligomeric golgi complex 2, mRNA (cDNA
clone MGC:23019 IMAGE:4876271), complete cds.
ACCESSION BC014960
VERSION BC014960.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2940)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2940)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: m Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6678675.
FEATURES Location/Qualifiers
source 1..2940
/db_xref="H-InvDB:HIT000036923"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23019 IMAGE:4876271"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2940
/gene="COG2"
/db_xref="GeneID:22796"
/db_xref="HGNC:HGNC:6546"
/db_xref="MIM:606974"
CDS 115..2331
/gene="COG2"
/codon_start=1
/product="component of oligomeric golgi complex 2"
/protein_id="AAH14960.1"
/db_xref="GeneID:22796"
/db_xref="HGNC:HGNC:6546"
/db_xref="MIM:606974"
/translation="MEKSRMNLPKGPDTLCFDKDEFMKEDFDVDHFVSDCRKRVQLEE
LRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVGMDKALNQLSVPLGQLREEVLSL
RSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSVEKIEKILNSQSSKETSALEA
SSPLLTGQILERIATEFNQLQFHAVQSKGMPLLDKVRPRIAGITAMLQQSLEGLLLEG
LQTSDVDIIRHCLRTYATIDKTRDAEALVGQVLVKPYIDEVIIEQFVESHPNGLQVMY
NKLLEFVPHHCRLLREVTGGAISSEKGNTVPGYDFLVNSVWPQIVQGLEEKLPSLFNP
GNPDAFHEKYTISMDFVRRLERQCGSQASVKRLRAHPAYHSFNKKWNLPVYFQIRFRE
IAGSLEAALTDVLEDAPAESPYCLLASHRTWSSLRRCWSDEMFLPLLVHRLWRLTLQI
LARYSVFVNELSLRPISNESPKEIKKPLVTGSKEPSITQGNTEDQGSGPSETKPVVSI
SRTQLVYVVADLDKLQEQLPELLEIIKPKLEMIGFKNFSSISAALEDSQSSFSACVPS
LSSKIIQDLSDSCFGFLKSALEVPRLYRRTNKEVPTTASSYVDSALKPLFQLQSGHKD
KLKQAIIQQWLEGTLSESTHKYYETVSDVLNSVKKMEESLKRLKQARKTTPANPVGPS
GGMSDDDKIRLQLALDVEYLGEQIQKLGLQASDIKSFSALAELVAAAKDQATAEQP"
BASE COUNT 853 a 647 c 695 g 745 t
ORIGIN
1 agcggacccc ctgtgccgtg gaaactggcg gtggccgcgg ccgccgagtc ggtctgcgca
61 gcctcctgcg ttttctcgct tggatcttgg cactgagagg cggtggccgg cgggatggag
121 aaaagtagga tgaacctgcc caaggggccg gacacgctct gcttcgacaa ggacgagttc
181 atgaaggaag atttcgatgt cgatcatttt gtgtctgact gtaggaagcg ggtccagctg
241 gaagaactga gagatgacct ggagctctac tataaacttc ttaaaacagc catggtcgaa
301 ctcatcaaca aggattatgc agattttgtc aatctttcaa caaacttggt tggcatggac
361 aaagccctca accagctttc tgtgcctttg ggacaattac gagaagaggt tctgagcctt
421 agatcgtctg tcagtgaagg aattcgggca gttgatgaac gaatgtctaa acaagaggac
481 attaggaaaa aaaagatgtg tgtattgagg cttatacaag ttattcggtc agttgagaaa
541 attgaaaaaa tcttaaactc tcaaagttct aaagaaacct ctgcactaga agcaagcagc
601 ccccttttga ctggacaaat tttggagaga attgccacag aatttaatca gttacagttt
661 catgctgttc aaagcaaagg catgcctctt ttggacaaag taagaccgcg tatagctggc
721 attacagcca tgttacagca gtcactggaa ggtctcctat tagaaggcct tcagacgtct
781 gacgtcgata taatacggca ctgcttgcgg acttacgcca cgattgacaa gacacgggac
841 gcggaggcct tagttggcca agtactagtg aaaccataca tagacgaggt gattatagag
901 cagtttgttg aatctcatcc caatggcctt caggtcatgt ataataaact cctggagttt
961 gttcctcacc attgccgcct tcttcgagaa gtcacaggag gtgccatctc cagtgaaaaa
1021 ggcaatactg ttcctggata tgactttttg gtgaattctg tttggccaca aatagtacaa
1081 ggattagaag aaaagttacc ctcgcttttt aatcctggga atcccgatgc atttcatgag
1141 aaatatacca taagtatgga ttttgtcaga agattggaac ggcagtgtgg atcacaggct
1201 agtgtaaaga gattaagagc ccatcctgcc tatcacagct tcaataagaa gtggaacttg
1261 cctgtttatt ttcaaataag atttagagaa atagcgggat ccttagaagc agcacttaca
1321 gatgtcctgg aagatgcccc agctgaaagt ccgtattgcc ttttggcttc tcatagaact
1381 tggagcagcc ttaggaggtg ttggtcagat gagatgttct tgccattact ggtgcatcgc
1441 ctgtggagac tcactctgca gattttggca cgatactctg tgtttgtcaa tgagctttca
1501 ctcaggccca tttctaatga aagtcccaag gagatcaaga aacctttggt aactggtagc
1561 aaagaacctt ccatcaccca aggaaacact gaagaccaag gaagtggtcc ttcggaaaca
1621 aagcctgtgg tttccatttc ccgcactcag ctcgtgtatg tggttgcaga cctggacaag
1681 cttcaggagc agcttccaga actcttggaa ataatcaagc caaaacttga aatgattggc
1741 tttaagaatt tttcttctat ctcagcagcc ctggaggact cccagagctc tttttcagcc
1801 tgtgtgccct ccttgagtag caagatcatc caggatttaa gtgactcttg cttcggtttc
1861 ctaaaaagcg ccctggaggt tcccaggctt taccgaagaa ccaataagga ggtcccaacc
1921 acagcttcct cctatgtgga cagtgctctg aagcccttat tccagcttca gagcggacac
1981 aaggataagc tcaaacaagc aataattcag cagtggctag aaggcactct cagtgaaagc
2041 actcataagt actatgaaac cgtgtcagat gtattaaact ctgtgaagaa gatggaagag
2101 agcctgaaaa ggctgaaaca agccagaaaa accactcccg ccaaccccgt cggtcccagt
2161 ggtggcatga gcgacgacga caaaatcagg ctgcagttgg ccctagatgt tgagtacttg
2221 ggagagcaga tacaaaagtt gggactacaa gcaagtgaca taaaaagctt ctcagctctc
2281 gcagagcttg ttgctgctgc caaggaccag gcaacagcag agcagcctta agcatcttgg
2341 aagatcccga ggttagattc ttaagcaaga gaagagttgg acttccaggc tgaaggggag
2401 aaagtgactc tgttctctta gcaaccgtct gtagcaaaga agtgcttcca gcatcactcc
2461 agcaacacgc ccatgcgtct tctctcagcg tatttgggtc ttctttgccc aaaagaacac
2521 aaaagccttt ttccattgta tggaagatag tttttaagac atttgaaact ttctactata
2581 gtttacagaa caaattattt tatttttatt gtaaatctta gtgtggaaga gctgatttct
2641 aaaatatgat taaagtaaat atatacctat gaatatcaag agtcgtctcc ctgagcctgt
2701 agttggaagt gacgactgta atggaatgat gtcttgtata gaaatgccct tctctgaaat
2761 aaagagaact cctgggcttt ctaaagaggc tgcgggaagc catcctccac tcccactgtg
2821 tgtgagagca gtgcttctga tcctgctgtc accccgacct ctggcaggag ccggcgccag
2881 taggaaagac ctccttccta aataaaagaa gtgtctccca aaaaaaaaaa aaaaaaaaaa
//