LOCUS BC014959 1128 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens RING1 and YY1 binding protein, mRNA (cDNA clone
MGC:23015 IMAGE:4902201), complete cds.
ACCESSION BC014959
VERSION BC014959.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1128)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1128)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: o Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24432049.
FEATURES Location/Qualifiers
source 1..1128
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23015 IMAGE:4902201"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1128
/gene="RYBP"
/gene_synonym="AAP1"
/gene_synonym="DEDAF"
/gene_synonym="YEAF1"
/db_xref="GeneID:23429"
/db_xref="HGNC:HGNC:10480"
/db_xref="MIM:607535"
CDS 152..838
/gene="RYBP"
/gene_synonym="AAP1"
/gene_synonym="DEDAF"
/gene_synonym="YEAF1"
/codon_start=1
/product="RING1 and YY1 binding protein"
/protein_id="AAH14959.1"
/db_xref="GeneID:23429"
/db_xref="HGNC:HGNC:10480"
/db_xref="MIM:607535"
/translation="MTMGDKKSPTRPKRQAKPAADEGFWDCSVCTFRNSAEAFKCSIC
DVRKGTSTRKPRINSQLVAQQVAQQYATPPPPKKEKKEKVEKQDKEKPEKDKEISPSV
TKKNTNKKTKPKSDILKDPPSEANSIQSANATTKTSETNHTSRPRLKNVDRSTAQQLA
VTVGNVTVIITDFKEKTRSSSTSSSTVTSSAGSEQQNQSSSGSESTDKGSSRSSTPKG
DMSAVNDESF"
BASE COUNT 341 a 290 c 282 g 215 t
ORIGIN
1 ggcggcggcc ggagctcgag ccccagcggc tgagggcggg cgggcgggcg cgggggaggg
61 aggggggccg gtccgcgacg actccccgga cggcgtttct cctccgagcg gcgccggttt
121 cggcttgggg ggggcggggt acagcccatc catgaccatg ggcgacaaga agagcccgac
181 caggccaaaa agacaagcga aacctgccgc agacgaaggg ttttgggatt gtagcgtctg
241 caccttcaga aacagtgctg aagcctttaa atgcagcatc tgcgatgtga ggaaaggcac
301 ctccaccaga aaacctcgga tcaattctca gctggtggcg caacaagtgg cacaacagta
361 tgccacccca ccacccccta aaaaggagaa gaaggagaaa gttgaaaagc aggacaaaga
421 gaaacctgag aaagacaagg aaattagtcc tagtgttacc aagaaaaata ccaacaagaa
481 aaccaaacca aagtctgaca ttctgaaaga tcctcctagt gaagcaaaca gcatacagtc
541 tgcaaatgct acaacaaaga ccagcgaaac aaatcacacc tcaaggcccc ggctgaaaaa
601 cgtggacagg agcactgcac agcagttggc agtaactgtg ggcaacgtca ccgtcattat
661 cacagacttt aaggaaaaga ctcgctcctc atcgacatcc tcatccacag tgacctccag
721 tgcagggtca gaacagcaga accagagcag ctcggggtca gagagcacag acaagggctc
781 ctcccgttcc tccacgccaa agggcgacat gtcagcagtc aatgatgaat ctttctgaaa
841 ttgcacatgg aattgtgaaa actatgaatc agggtatgaa attcaaaacc tccacctgcc
901 catgctgctt gcatccctgg agaatcttct gtggacatcg acctcttagt gatgctgcca
961 ggataatttc tgcttgccat gggcatctgg ccaccaagga atttcgcacc ctgacgatta
1021 ctcttgacac ttttatgtat tccattgttt tatatgattt tcctaacaat catttataat
1081 tggatgtgct cctgaatcta ctttttataa aaaaaaaaaa aaaaaaaa
//