LOCUS BC014953 743 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 6 open reading frame 115, mRNA (cDNA clone
IMAGE:4849571), complete cds.
ACCESSION BC014953
VERSION BC014953.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 743)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 743)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Daniel McVicar, DBS/NCI
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..743
/db_xref="H-InvDB:HIT000036918"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4849571"
/tissue_type="Blood, natural killer cell"
/clone_lib="NIH_MGC_106"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..743
/gene="C6orf115"
/gene_synonym="HSPC280"
/gene_synonym="PRO2013"
/db_xref="GeneID:58527"
/db_xref="HGNC:HGNC:21230"
CDS 74..319
/gene="C6orf115"
/gene_synonym="HSPC280"
/gene_synonym="PRO2013"
/codon_start=1
/product="C6orf115 protein"
/protein_id="AAH14953.1"
/db_xref="GeneID:58527"
/db_xref="HGNC:HGNC:21230"
/translation="MNVDHEVNLLVEEIHRLGSKNADGKLSVKFGVLFRDDKCANLFE
ALVGTLKAAKRRKIVTYPGELLLQGVHDDVDIILLQD"
BASE COUNT 259 a 106 c 157 g 221 t
ORIGIN
1 ctgaagaagg taaccgggtc cagacccacg cggcgccagt tctccggcgg gaaggaaaac
61 cgcgcagaga gcaatgaatg tggatcacga ggttaacctc ttagtggagg aaattcatcg
121 tttgggttca aaaaatgctg atggaaagtt aagcgtgaaa tttggggtcc tcttccgtga
181 tgataaatgt gccaacctct ttgaagcatt ggtaggaact cttaaagctg caaaacgaag
241 gaagattgta acatatccag gagagctgct tctgcaaggt gttcatgatg atgttgacat
301 tatattactg caagattaat gtggtttaca tatctttatg tactgccatt ttttgtttct
361 ggtaaactgg aatataaagt gaaagaacaa acatttgaac atacttaatg tatttttata
421 gaactttgta aacgaaagga gattcatgtt ttagaagtct gtcctttttt atatcttgaa
481 agaaaatcta tgtatgatgc tataaaataa atcctattat ttttctcagg aatctggtta
541 ggaattgcag gcaatgagat tttttgcggg gcagggatgg gaatgtttgt tcataaataa
601 ttagacattt tctatagata tttgacattc tgcgaaagca acaagcaaac tgaagaccaa
661 ctcctatgag aaatattatg atgtttatgt aataaagaca tgtaactgtc ttaaaaaaaa
721 aaaaaaaaaa aaaaaaaaaa aaa
//