LOCUS BC014947 1923 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens FGGY carbohydrate kinase domain containing, mRNA (cDNA
clone MGC:22958 IMAGE:4871664), complete cds.
ACCESSION BC014947
VERSION BC014947.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1923)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1923)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: l Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361729.
FEATURES Location/Qualifiers
source 1..1923
/db_xref="H-InvDB:HIT000036912"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22958 IMAGE:4871664"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1923
/gene="FGGY"
/gene_synonym="RP11-242B9.1"
/db_xref="GeneID:55277"
/db_xref="HGNC:HGNC:25610"
/db_xref="MIM:611370"
CDS 434..1753
/gene="FGGY"
/gene_synonym="RP11-242B9.1"
/codon_start=1
/product="FGGY carbohydrate kinase domain containing"
/protein_id="AAH14947.1"
/db_xref="GeneID:55277"
/db_xref="HGNC:HGNC:25610"
/db_xref="MIM:611370"
/translation="MWLDHRAVSQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKEN
LREICWDKAGHFFDLPDFLSWKATGVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLED
FVADNYSKIGNQVLPPGASLGNGLTPEAARDLGLLPGIAVAASLIDAHAGGLGVIGAD
VRGHGLICEGQPVTSRLAVICGTSSCHMGISKDPIFVPGVWGPYFSAMVPGFWLNEGG
QSVTGKLIDHMVQGHAAFPELQVKATARCQSIYAYLNSHLDLIKKAQPVGFLTVDLHV
WPDFHGNRSPLADLTLKGMVTGLKLSQDLDDLAILYLATVQAIALGTRFIIEAMEAAG
HSISTLFLCGGLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQ
EAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEHQKEYLAIMNDD"
BASE COUNT 486 a 422 c 520 g 495 t
ORIGIN
1 cttcctcctc ctggccgctt agtctcacac ccgccgggcc gttgttcccg agacgttgtt
61 gagtcccctg tgtcctcttc tgggtggagg aactgcaatg tctggtggag aacagaaacc
121 agagaggtac tatgtgggtg tggacgttgg aacaggcagt gtccgtgcag ctctggtgga
181 ccagagtggg gtcctgttgg cttttgcaga ccagccaatt aagaattggg agccccagtt
241 caaccaccat gagcagtcct ccgaggacat ctgggctgcg tgctgtgttg tcacaaagaa
301 agttgtacaa gggattgatt taaaccaaat tcgaggactt gggtttgatg ccacgtgttc
361 tctggttgtt ttggataagc agtttcaccc attaccagtc aaccaggaag gggattccca
421 tcgaaacgtc atcatgtggc tggaccatcg agcagtcagt caagttaaca ggatcaatga
481 gaccaagcac agtgtcctcc agtacgtcgg gggggtgatg tctgtggaaa tgcaggcccc
541 gaaacttctg tggctgaaag agaacttgag agagatttgc tgggataagg cgggacattt
601 ctttgatctc ccggacttct tatcgtggaa ggcaacaggt gtcacagcac ggtctctctg
661 ctccctggtg tgtaagtgga catattcagc agagaaaggc tgggacgaca gtttctggaa
721 aatgattggt ttggaagact ttgttgcaga taattacagc aaaataggaa accaagtgct
781 acctcctgga gcttctcttg gaaatgggct cacaccagag gcagcaagag accttggcct
841 tctccctggg attgcggtcg cagcttcact cattgatgcc catgcaggag gactaggagt
901 gattggggca gatgtgagag ggcacggcct catctgtgag gggcagccag tgacgtcacg
961 gctggctgtc atctgtggaa cgtcttcttg tcacatgggg atcagcaaag acccgatttt
1021 tgtaccaggc gtctgggggc cttatttctc agccatggta cctgggttct ggctgaatga
1081 aggtggtcag agcgttactg gaaaattgat agaccacatg gtacaaggcc atgctgcttt
1141 tccagaacta caagtaaagg ccacagccag atgccagagt atatatgcat atttgaacag
1201 tcacctggat ctgattaaga aggctcagcc tgtgggtttc cttactgttg atttacatgt
1261 ttggccagat ttccatggca accggtctcc cttagcagat ctgacactaa agggcatggt
1321 caccggattg aaactgtctc aggaccttga tgatcttgcc attctctacc tggccacagt
1381 tcaagccatt gctttgggga ctcgcttcat tatagaagcc atggaggcag cagggcactc
1441 aatcagtact cttttcctat gtggaggcct cagcaagaat cccctttttg tgcaaatgca
1501 tgcggacatt actggcatgc ctgtggtcct gtcgcaagag gtggagtccg ttcttgtggg
1561 tgctgctgtt ctgggtgcct gtgcctcagg ggatttcgct tctgtacagg aagcaatggc
1621 aaaaatgagc aaagttggga aagttgtgtt cccgagacta caggataaaa aatactatga
1681 taagaaatac caagtattcc tgaagctggt tgaacaccag aaggagtatt tggcgatcat
1741 gaatgatgac tgaacagggc ttgcaggtgc tgatgccaga agcttctgtg ccattgcatt
1801 aaagacttct gtcatttgat ccatgttcaa gacccttgag gtattgtttc atcatttctg
1861 tattgtcttt caataaagaa aacaaacatg tgcaaccaaa aaaaaaaaaa aaaaaaaaaa
1921 aaa
//