LOCUS BC014944 2609 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens SAFB-like, transcription modulator, mRNA (cDNA clone
IMAGE:4864860), partial cds.
ACCESSION BC014944
VERSION BC014944.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2609)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2609)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: i Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376087.
FEATURES Location/Qualifiers
source 1..2609
/db_xref="H-InvDB:HIT000088521"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4864860"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2609
/gene="SLTM"
/gene_synonym="FLJ10005"
/gene_synonym="FLJ13213"
/gene_synonym="Met"
/db_xref="GeneID:79811"
/db_xref="HGNC:HGNC:20709"
/db_xref="IMGT/GENE-DB:20709"
/db_xref="MIM:20709"
CDS <1..2019
/gene="SLTM"
/gene_synonym="FLJ10005"
/gene_synonym="FLJ13213"
/gene_synonym="Met"
/codon_start=1
/product="SLTM protein"
/protein_id="AAH14944.1"
/db_xref="GeneID:79811"
/db_xref="HGNC:HGNC:20709"
/db_xref="IMGT/GENE-DB:20709"
/db_xref="MIM:20709"
/translation="TSSKDDKGSTSSTSGSSGSSTKNIWVSGLSSNTKAADLKNLFGK
YGKVLSAKVVTNARSPGAKCYGIVTMSSSTEVSRCIAHLHRTELHGQLISVEKVKGDP
SKKEMKKENDEKSSSRSSGDKKNTSDRSSKTQASVKKEEKRSSEKSEKKESKDTKKIE
GKDEKNDNGASGQTSESIKKSEEKKRISSKSPGHMVILDQTKGDHCRPSRRGRYEKIH
GRSKEKERASLDKKRDKDYRRKEILSFEKMKEQRLREHLVRFERLRRAMELRRRREIA
ERERRERERIRIIREREERERLQRERERLEIERQKLERERMERERLERERIRIEQERR
KEAERIAREREELRRQQQQLRYEQEKRNSLKRPRDVDHRRDDPYWSENKKLSLDTDAR
FGHGSDYSRQQNRFNDFDHRERGRFPESSAVQSSSFERRDRFVGQSEGKKARPTARRE
DPSFERYPKNFSDSRRNEPPPPRNELRESDRREVRGERDERRTVIIHDRPDITHPRHP
REAGPNPSRPTSWKSEGSMSTDKRETRVERPERSGREVSGHSVRGAPPGNRSSASGYG
SREGDRGVITDRGGGSQHYPEERHVVERHGRDTSGPRKEWHGPPSQGPSYHDTRRMGD
GRAGAGMITQHSSNASPINRIVQISGNSMPRGSGSGFKPFKGGPPRRF"
BASE COUNT 914 a 440 c 651 g 604 t
ORIGIN
1 acatcatcta aagatgacaa aggaagtaca agtagtacta gtggtagcag tggaagctca
61 actaaaaata tctgggttag tggactttca tctaatacca aagctgctga tttgaagaac
121 ctctttggca aatatggaaa ggttctgagt gcaaaagtag ttacaaatgc tcgaagtcct
181 ggggcaaaat gctatggcat tgtaactatg tcttcaagca cagaggtgtc caggtgtatt
241 gcacatcttc atcgcactga gctgcatgga cagctgattt ctgttgaaaa agtaaaaggt
301 gatccctcta agaaagaaat gaagaaagaa aatgatgaaa agagtagttc aagaagttct
361 ggagataaaa aaaatacgag tgatagaagt agcaagacac aagcctctgt caaaaaagaa
421 gagaaaagat cgtctgagaa atctgaaaaa aaagaaagca aggatactaa gaaaatagaa
481 ggtaaagatg agaagaatga taatggagca agtggccaaa catcagaatc gattaaaaaa
541 agtgaagaaa agaagcgaat aagttccaag agtccaggac atatggtaat actagaccaa
601 actaaaggag atcattgtag accatcaaga agaggaagat atgagaaaat tcatggaaga
661 agtaaggaaa aggagagagc tagtctagat aaaaaaagag ataaagacta cagaaggaaa
721 gagatcttgt cttttgaaaa gatgaaggaa caaaggttga gagaacattt agttcgtttt
781 gaaaggctgc gacgagcaat ggaacttcga agacgaagag agattgcaga gagagagcgt
841 cgagagcgag aacgcattag aataattcgt gaacgggaag aacgggaacg cttacagaga
901 gagagagagc gcctagaaat tgaaaggcaa aaactagaga gagagagaat ggaacgcgaa
961 cgcttggaaa gggaacgcat tcgtattgaa caggaacgtc gtaaggaagc tgaacggatt
1021 gctcgagaaa gagaggaact cagaaggcaa caacagcagc ttcgttatga acaagaaaaa
1081 aggaattcct tgaaacgccc acgtgatgta gatcataggc gagatgatcc ttactggagc
1141 gagaataaaa agttgtctct agatacagat gcacgatttg gccatggatc cgactactct
1201 cgccaacaga acagatttaa tgactttgat caccgagaga ggggcaggtt tcctgagagt
1261 tcagcagtac agtcttcatc ttttgaaagg cgggatcgct ttgttggtca aagtgagggg
1321 aaaaaagcac gacctactgc acgaagggaa gatccaagct tcgaaagata tcccaaaaat
1381 ttcagtgact ccagaagaaa tgagcctcca ccaccaagaa atgaacttag agaatcagac
1441 aggcgagaag tacgagggga gcgagacgaa aggagaacgg tgattattca tgacaggcct
1501 gatatcactc atcctagaca tcctcgagag gcagggccca atccttccag acccaccagc
1561 tggaaaagtg aaggaagcat gtccactgac aaacgggaaa caagagttga aaggccagaa
1621 cgatctggga gagaagtatc agggcacagt gtgagaggcg ctccccctgg gaatcgtagc
1681 agcgcttcgg ggtacgggag cagagaggga gacagaggag tcatcacaga ccgaggaggt
1741 ggatcacagc actatcctga ggagcgacat gtggttgaac gccatggacg ggacacaagc
1801 ggaccaagga aagagtggca tggtccaccc tctcaagggc ctagctatca tgatacgagg
1861 cgaatgggtg acggccgggc aggagcaggc atgataaccc aacattcaag taacgcatcc
1921 ccaattaata gaattgtaca aatcagtggc aattccatgc caagaggaag tggctccgga
1981 tttaagccat ttaagggtgg acctccgcga cgattctgaa aatgagctct ctgccaaggt
2041 tttaagataa tttattgaaa tctcctgtaa actttacttg actacttatg aagaggacct
2101 ctgacttgct tgagagttct gtcagacttt tctttttaaa aatttaacat gattgctttt
2161 ctcaattttg gagaagatgt ttaaatagtt ctgttgtaac ttttaatagt tttgtgtatc
2221 attcaacttt ttttcttgca gcaccgaggc acatttgaaa agatggaatt gaagtcgttt
2281 tgtttaacgc tgtgtgaata taaagagtag tttgcagctg tgtggtagtg gtttaatttg
2341 cagccttagc tctgtggtgt ctggctctag agttacttct ttttaccaag cattttcagc
2401 ctccattttg aaggctgtct acacttaaga agtcttagct gtctaatttt tagagaataa
2461 gattgttcat tgcatttctg agtattatgt aacctatttt tgcagaaggt actgttacat
2521 taagtgcatc tgtgtatcct ggtttaaaaa aatgtaatct tttttgaaat aaaccttcat
2581 attctgtaaa aaaaaaaaaa aaaaaaaaa
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