LOCUS BC014896 1855 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ubiquitin specific peptidase 18, mRNA (cDNA clone MGC:10206 IMAGE:3910720), complete cds. ACCESSION BC014896 VERSION BC014896.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1855) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1855) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 15 Row: h Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32313609. FEATURES Location/Qualifiers source 1..1855 /db_xref="H-InvDB:HIT000036888" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:10206 IMAGE:3910720" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1855 /gene="USP18" /gene_synonym="ISG43" /gene_synonym="UBP43" /db_xref="GeneID:11274" /db_xref="HGNC:HGNC:12616" /db_xref="MIM:607057" CDS 145..1263 /gene="USP18" /gene_synonym="ISG43" /gene_synonym="UBP43" /codon_start=1 /product="ubiquitin specific peptidase 18" /protein_id="AAH14896.1" /db_xref="GeneID:11274" /db_xref="HGNC:HGNC:12616" /db_xref="MIM:607057" /translation="MSKAFGLLRQICQSILAESSQSPADLEEKKEEDSNMKREQPRER PRAWDYPHGLVGLHNIGQTCCLNSLIQVFVMNVDFTRILKRITVPRGADEQRRSVPFQ MLLLLEKMQDSRQKAVRPLELAYCLQKCNVPLFVQHDAAQLYLKLWNLIKDQITDVHL VERLQALYTIRVKDSLICVDCAMESSRNSSMLTLPLSLFDVDSKPLKTLEDALHCFFQ PRELSSKSKCFCENCGKKTRGKQVLKLTHLPQTLTIHLMRFSIRNSQTRKICHSLYFP QSLDFSQILPMKRESCDAEEQSGGQYELFAVIAHVGMADSGHYCVYIRNAVDGKWFCF NDSNICLVSWEDIQCTYGNPNYHWQETAYLLVYMKMEC" BASE COUNT 473 a 432 c 484 g 466 t ORIGIN 1 ctcagcagcg gaggctggac gcttgcatgg cgcttgagag attccatcgt gcctggctca 61 cataagcgct tcctggaagt gaagtcgtgc tgtcctgaac gcgggccagg cagctgcggc 121 ctgggggttt tggagtgatc acgaatgagc aaggcgtttg ggctcctgag gcaaatctgt 181 cagtccatcc tggctgagtc ctcgcagtcc ccggcagatc ttgaagaaaa gaaggaagaa 241 gacagcaaca tgaagagaga gcagcccaga gagcgtccca gggcctggga ctaccctcat 301 ggcctggttg gtttacacaa cattggacag acctgctgcc ttaactcctt gattcaggtg 361 ttcgtaatga atgtggactt caccaggata ttgaagagga tcacggtgcc caggggagct 421 gacgagcaga ggagaagcgt ccctttccag atgcttctgc tgctggagaa gatgcaggac 481 agccggcaga aagcagtgcg gcccctggag ctggcctact gcctgcagaa gtgcaacgtg 541 cccttgtttg tccaacatga tgctgcccaa ctgtacctca aactctggaa cctgattaag 601 gaccagatca ctgatgtgca cttggtggag agactgcagg ccctgtatac gatccgggtg 661 aaggactcct tgatttgcgt tgactgtgcc atggagagta gcagaaacag cagcatgctc 721 accctcccac tttctctttt tgatgtggac tcaaagcccc tgaagacact ggaggacgcc 781 ctgcactgct tcttccagcc cagggagtta tcaagcaaaa gcaagtgctt ctgtgagaac 841 tgtgggaaga agacccgtgg gaaacaggtc ttgaagctga cccatttgcc ccagaccctg 901 acaatccacc tcatgcgatt ctccatcagg aattcacaga cgagaaagat ctgccactcc 961 ctgtacttcc cccagagctt ggatttcagc cagatccttc caatgaagcg agagtcttgt 1021 gatgctgagg agcagtctgg agggcagtat gagctttttg ctgtgattgc gcacgtggga 1081 atggcagact ccggtcatta ctgtgtctac atccggaatg ctgtggatgg aaaatggttc 1141 tgcttcaatg actccaatat ttgcttggtg tcctgggaag acatccagtg tacctacgga 1201 aatcctaact accactggca ggaaactgca tatcttctgg tttacatgaa gatggagtgc 1261 taatggaaat gcccaaaacc ttcagagatt gacacgctgt cattttccat ttccgttcct 1321 ggatctacgg agtcttctaa gagattttgc aatgaggaga agcattgttt tcaaactata 1381 taactgagcc ttatttataa ttagggatat tatcaaaata tgtaaccatg aggcccctca 1441 ggtcctgatc agtcagaatg gatgctttca ccagcagacc cggccatgtg gctgctcggt 1501 cctgggtgct cgctgctgtg caagacatta gccctttagt tatgagcctg tgggaacttc 1561 aggggttccc agtggggaga gcagtggcag tgggaggcat ctgggggcca aaggtcagtg 1621 gcagggggta tttcagtatt atacaactgc tgtgaccaga cttgtatact ggctgaatat 1681 cagtgctgtt tgtaattttt cactttgaga accaacatta attccatatg aatcaagtgt 1741 tttgtaactg ctattcattt attcagcaaa tatttattga tcatctcttc tccataagat 1801 agtgtgataa acacagtcat gaataaagtt attttccaca aaaaaaaaaa aaaaa //