LOCUS BC014896 1855 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin specific peptidase 18, mRNA (cDNA clone
MGC:10206 IMAGE:3910720), complete cds.
ACCESSION BC014896
VERSION BC014896.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1855)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1855)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: h Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32313609.
FEATURES Location/Qualifiers
source 1..1855
/db_xref="H-InvDB:HIT000036888"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10206 IMAGE:3910720"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1855
/gene="USP18"
/gene_synonym="ISG43"
/gene_synonym="UBP43"
/db_xref="GeneID:11274"
/db_xref="HGNC:HGNC:12616"
/db_xref="MIM:607057"
CDS 145..1263
/gene="USP18"
/gene_synonym="ISG43"
/gene_synonym="UBP43"
/codon_start=1
/product="ubiquitin specific peptidase 18"
/protein_id="AAH14896.1"
/db_xref="GeneID:11274"
/db_xref="HGNC:HGNC:12616"
/db_xref="MIM:607057"
/translation="MSKAFGLLRQICQSILAESSQSPADLEEKKEEDSNMKREQPRER
PRAWDYPHGLVGLHNIGQTCCLNSLIQVFVMNVDFTRILKRITVPRGADEQRRSVPFQ
MLLLLEKMQDSRQKAVRPLELAYCLQKCNVPLFVQHDAAQLYLKLWNLIKDQITDVHL
VERLQALYTIRVKDSLICVDCAMESSRNSSMLTLPLSLFDVDSKPLKTLEDALHCFFQ
PRELSSKSKCFCENCGKKTRGKQVLKLTHLPQTLTIHLMRFSIRNSQTRKICHSLYFP
QSLDFSQILPMKRESCDAEEQSGGQYELFAVIAHVGMADSGHYCVYIRNAVDGKWFCF
NDSNICLVSWEDIQCTYGNPNYHWQETAYLLVYMKMEC"
BASE COUNT 473 a 432 c 484 g 466 t
ORIGIN
1 ctcagcagcg gaggctggac gcttgcatgg cgcttgagag attccatcgt gcctggctca
61 cataagcgct tcctggaagt gaagtcgtgc tgtcctgaac gcgggccagg cagctgcggc
121 ctgggggttt tggagtgatc acgaatgagc aaggcgtttg ggctcctgag gcaaatctgt
181 cagtccatcc tggctgagtc ctcgcagtcc ccggcagatc ttgaagaaaa gaaggaagaa
241 gacagcaaca tgaagagaga gcagcccaga gagcgtccca gggcctggga ctaccctcat
301 ggcctggttg gtttacacaa cattggacag acctgctgcc ttaactcctt gattcaggtg
361 ttcgtaatga atgtggactt caccaggata ttgaagagga tcacggtgcc caggggagct
421 gacgagcaga ggagaagcgt ccctttccag atgcttctgc tgctggagaa gatgcaggac
481 agccggcaga aagcagtgcg gcccctggag ctggcctact gcctgcagaa gtgcaacgtg
541 cccttgtttg tccaacatga tgctgcccaa ctgtacctca aactctggaa cctgattaag
601 gaccagatca ctgatgtgca cttggtggag agactgcagg ccctgtatac gatccgggtg
661 aaggactcct tgatttgcgt tgactgtgcc atggagagta gcagaaacag cagcatgctc
721 accctcccac tttctctttt tgatgtggac tcaaagcccc tgaagacact ggaggacgcc
781 ctgcactgct tcttccagcc cagggagtta tcaagcaaaa gcaagtgctt ctgtgagaac
841 tgtgggaaga agacccgtgg gaaacaggtc ttgaagctga cccatttgcc ccagaccctg
901 acaatccacc tcatgcgatt ctccatcagg aattcacaga cgagaaagat ctgccactcc
961 ctgtacttcc cccagagctt ggatttcagc cagatccttc caatgaagcg agagtcttgt
1021 gatgctgagg agcagtctgg agggcagtat gagctttttg ctgtgattgc gcacgtggga
1081 atggcagact ccggtcatta ctgtgtctac atccggaatg ctgtggatgg aaaatggttc
1141 tgcttcaatg actccaatat ttgcttggtg tcctgggaag acatccagtg tacctacgga
1201 aatcctaact accactggca ggaaactgca tatcttctgg tttacatgaa gatggagtgc
1261 taatggaaat gcccaaaacc ttcagagatt gacacgctgt cattttccat ttccgttcct
1321 ggatctacgg agtcttctaa gagattttgc aatgaggaga agcattgttt tcaaactata
1381 taactgagcc ttatttataa ttagggatat tatcaaaata tgtaaccatg aggcccctca
1441 ggtcctgatc agtcagaatg gatgctttca ccagcagacc cggccatgtg gctgctcggt
1501 cctgggtgct cgctgctgtg caagacatta gccctttagt tatgagcctg tgggaacttc
1561 aggggttccc agtggggaga gcagtggcag tgggaggcat ctgggggcca aaggtcagtg
1621 gcagggggta tttcagtatt atacaactgc tgtgaccaga cttgtatact ggctgaatat
1681 cagtgctgtt tgtaattttt cactttgaga accaacatta attccatatg aatcaagtgt
1741 tttgtaactg ctattcattt attcagcaaa tatttattga tcatctcttc tccataagat
1801 agtgtgataa acacagtcat gaataaagtt attttccaca aaaaaaaaaa aaaaa
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