LOCUS BC014890 2010 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens snail homolog 2 (Drosophila), mRNA (cDNA clone
MGC:10182 IMAGE:3908245), complete cds.
ACCESSION BC014890
VERSION BC014890.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2010)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2010)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: c Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24497625.
FEATURES Location/Qualifiers
source 1..2010
/db_xref="H-InvDB:HIT000036885"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10182 IMAGE:3908245"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2010
/gene="SNAI2"
/gene_synonym="MGC10182"
/gene_synonym="SLUGH1"
/gene_synonym="WS2D"
/db_xref="GeneID:6591"
/db_xref="HGNC:HGNC:11094"
/db_xref="MIM:602150"
CDS 153..959
/gene="SNAI2"
/gene_synonym="MGC10182"
/gene_synonym="SLUGH1"
/gene_synonym="WS2D"
/codon_start=1
/product="snail homolog 2 (Drosophila)"
/protein_id="AAH14890.1"
/db_xref="GeneID:6591"
/db_xref="HGNC:HGNC:11094"
/db_xref="MIM:602150"
/translation="MPRSFLVKKHFNASKKPNYSELDTHTVIISPYLYESYSMPVIPQ
PEILSSGAYSPITVWTTAAPFHAQLPNGLSPLSGYSSSLGRVSPPPPSDTSSKDHSGS
ESPISDEEERLQSKLSDPHAIEAEKFQCNLCNKTYSTFSGLAKHKQLHCDAQSRKSFS
CKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCPHC
NRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGCCVAH"
BASE COUNT 612 a 465 c 384 g 549 t
ORIGIN
1 agccgggtga cttcagaggc gccggcccgt ccgtctgccg cacctgagca cggcccctgc
61 ccgagcctgg cccgccgcga tgctgtaggg accgccgtgt cctcccgccg gaccgttatc
121 cgcgccgggc gcccgccaga cccgctggca agatgccgcg ctccttcctg gtcaagaagc
181 atttcaacgc ctccaaaaag ccaaactaca gcgaactgga cacacataca gtgattattt
241 ccccgtatct ctatgagagt tactccatgc ctgtcatacc acaaccagag atcctcagct
301 caggagcata cagccccatc actgtgtgga ctaccgctgc tccattccac gcccagctac
361 ccaatggcct ctctcctctt tccggatact cctcatcttt ggggcgagtg agtccccctc
421 ctccatctga cacctcctcc aaggaccaca gtggctcaga aagccccatt agtgatgaag
481 aggaaagact acagtccaag ctttcagacc cccatgccat tgaagctgaa aagtttcagt
541 gcaatttatg caataagacc tattcaactt tttctgggct ggccaaacat aagcagctgc
601 actgcgatgc ccagtctaga aaatctttca gctgtaaata ctgtgacaag gaatatgtga
661 gcctgggcgc cctgaagatg catattcgga cccacacatt accttgtgtt tgcaagatct
721 gcggcaaggc gttttccaga ccctggttgc ttcaaggaca cattagaact cacacggggg
781 agaagccttt ttcttgccct cactgcaaca gagcatttgc agacaggtca aatctgaggg
841 ctcatctgca gacccattct gatgtaaaga aataccagtg caaaaactgc tccaaaacct
901 tctccagaat gtctctcctg cacaaacatg aggaatctgg ctgctgtgta gcacactgag
961 tgacgcaatc aatgtttact cgaacagaat gcatttcttc actccgaagc caaatgacaa
1021 ataaagtcca aaggcatttt ctcctgtgct gaccaaccaa ataatatgta tagacacaca
1081 cacatatgca cacacacaca cacacaccca cagagagaga gctgcaagag catggaattc
1141 atgtgtttaa agataatcct ttccatgtga agtttaaaat tactatatat ttgctgatgg
1201 ctagattgag agaataaaag acagtaacct ttctcttcaa agataaaatg aaaagcacat
1261 tgcatctttt cttcctaaaa aaatgcaaag atttacattg ctgccaaatc atttcaactg
1321 aaaagaacag tattgctttg taatagagtc tgtaatagga tttcccatag gaagagatct
1381 gccagacgcg aactcaggtg ccttaaaaag tattccaagt ttactccatt acatgtcggt
1441 tgtctggttg ccattgttga actaaagcct ttttttgatt acctgtagtg ctttaaagta
1501 tatttttaaa agggaggaaa aaaataacaa gaacaaaaca caggagaatg tattaaaagt
1561 atttttgttt tgttttgttt ttgccaatta acagtatgtg ccttggggga ggagggaaag
1621 attagctttg aacattcctg gcgcatgctc cattgtctta ctattttaaa acattttaat
1681 aatttttgaa aattaattaa agatgggaat aagtgcaaaa gaggattctt acaaattcat
1741 taatgtactt aaactatttc aaatgcatac cacaaatgca ataatacaat accccttcca
1801 agtgcctttt taaattgtat agttgatgag tcaatgtaaa tttgtgttta tttttatatg
1861 attgaatgag ttctgtatga aactgagatg ttgtctatag ctatgtctat aaacaacctg
1921 aagacttgtg aaatcaatgt ttctttttta aaaaacaatt ttcaagtttt ttttacaata
1981 aacagttttg atttaaaaaa aaaaaaaaaa
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