LOCUS BC014889 2423 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens D4, zinc and double PHD fingers family 2, mRNA (cDNA
clone MGC:10180 IMAGE:3908181), complete cds.
ACCESSION BC014889
VERSION BC014889.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2423)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2423)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC014889.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 15 Row: c Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21536317.
FEATURES Location/Qualifiers
source 1..2423
/db_xref="H-InvDB:HIT000036884"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:10180 IMAGE:3908181"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2423
/gene="DPF2"
/gene_synonym="MGC10180"
/gene_synonym="ubi-d4"
/gene_synonym="UBID4"
/db_xref="GeneID:5977"
/db_xref="HGNC:HGNC:9964"
/db_xref="MIM:601671"
CDS 12..1187
/gene="DPF2"
/gene_synonym="MGC10180"
/gene_synonym="ubi-d4"
/gene_synonym="UBID4"
/codon_start=1
/product="D4, zinc and double PHD fingers family 2"
/protein_id="AAH14889.1"
/db_xref="GeneID:5977"
/db_xref="HGNC:HGNC:9964"
/db_xref="MIM:601671"
/translation="MAAVVENVVKLLGEQYYKDAMEQCHNYNARLCAERSVRLPFLDS
QTGVAQSNCYIWMEKRHRGPGLASGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDT
DQTLKKEGLISQDGSSLEALLRTDPLEKRGAPDPRVDDDSLGEFPVTNSRARKRILEP
DDFLDDLDDEDYEEDTPKRRGKGKSKGKGVGSARKKLDASILEDRDKPYACDICGKRY
KNRPGLSYHYAHSHLAEEEGEDKEDSQPPTPVSQRSEEQKSKKGPDGLALPNNYCDFC
LGDSKINKKTGQPEELVSCSDCGRSGHPSCLQFTPVMMAAVKTYRWQCIECKCCNICG
TSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLCLDLLKEKASIYQNQNSS"
BASE COUNT 528 a 698 c 616 g 581 t
ORIGIN
1 gaacagggaa gatggcggct gtggtggaga atgtagtgaa gctccttggg gagcagtact
61 acaaagatgc catggagcag tgccacaatt acaatgctcg cctctgtgct gagcgcagcg
121 tgcgcctgcc tttcttggac tcacagaccg gagtagccca gagcaattgt tacatctgga
181 tggaaaagcg acaccggggt ccaggattgg cctccggaca gctgtactcc taccctgccc
241 ggcgctggcg gaaaaagcgg cgagcccatc cccctgagga tccacgactt tccttcccat
301 ctattaagcc agacacagac cagaccctga agaaggaggg gctgatctct caggatggca
361 gtagtttaga ggctctgttg cgcactgacc ccctggagaa gcgaggtgcc ccggatcccc
421 gagttgatga tgacagcctg ggcgagtttc ctgtgaccaa cagtcgagcg cgaaagcgga
481 tcctagaacc agatgacttc ctggatgacc tcgatgatga agactatgaa gaagatactc
541 ccaagcgtcg gggaaagggg aaatccaagg gtaagggtgt gggcagtgcc cgtaagaagc
601 tggatgcttc catcctggag gaccgggata agccctatgc ctgtgacatt tgtggaaaac
661 gttacaagaa ccgaccaggc ctcagttacc actatgccca ctcccacttg gctgaggagg
721 agggcgagga caaggaagac tctcaaccac ccactcctgt ttcccagagg tctgaggagc
781 agaaatccaa aaagggtcct gatggattgg ccttgcccaa caactactgt gacttctgcc
841 tgggggactc aaagattaac aagaagacgg gacaacccga ggagctggtg tcctgttctg
901 actgtggccg ctcagggcat ccatcttgcc tccaatttac ccccgtgatg atggcggcag
961 tgaagacata ccgctggcag tgcatcgagt gcaaatgttg caatatctgc ggcacctccg
1021 agaatgacga ccagttgctc ttctgtgatg actgcgatcg tggctaccac atgtactgtc
1081 tcaccccgtc catgtctgag ccccctgaag gaagttggag ctgccacctg tgtctggacc
1141 tgttgaaaga gaaagcttcc atctaccaga accagaactc ctcttgatgt ggccacccac
1201 ctgctccccg acatatctaa ggctgtttct ctcctccact tcatatttca tacccatctt
1261 tcccttcttc ctcctctcct tcacaaatcc agagaacctt ggggtggttg tgccagcctg
1321 cctttggcag ctgcaagctg aggtggcagc tctgaccacc tctggcccca ggccctcagg
1381 gagaaaggag caacacactg cccctaggcg tgcgtgtggc ccagtttctc tctgctctcc
1441 attaagtgca ttcactctgc ttgccttggg cccagcccct ggtgatcaca gggttcaaac
1501 agtgtcctcc tagaaagagt gggagagcag ctcacttctc tgtgttctgc ctcccctctg
1561 gtctccagag ttttcctgtc ctctagaggc aagccaggcc agggagctgg gagcgagcaa
1621 gctgaggcca cgtccacaag gagcttttca tgcccctgtg ccgcatagcc tcacctcttt
1681 cctccagagt ggctctctgc ggccctgtgt tcctgctaca gagtgttctt ttctggagtc
1741 aggatgttct cggtcaccct cctggttctg ccctgtccca ttccacccca ccccaggggg
1801 aacagtagct tcaccttgtt attcccattg ctctcctggc tcactcttac ggtcggtctc
1861 cagtgactga agcattcccc acccttggaa tttctcatct tctgcctccc ttcctactcc
1921 ttttggtttt gtggggagag gggaaggatc agggggccag gccagcagct cgggggccac
1981 aaggagatgg ataatgtgcc tgttttttaa cacaacaaaa aagcctacct ccaaaatccc
2041 ctttttgttc ttcctggacc tgggcattca gcctcctgct cttaactgaa ttgggagcct
2101 ctgccacctg ccccgtgtat cctggctctc agctcatggg gaagccacat agacatccct
2161 ttcttccctt gcacgctcgc tagcagctgg taaggtcttc acaccctgat tcctcaagtt
2221 ttctgcttag tggcactgac attaagtagt ggggggacag tccatgccag gacaccctgg
2281 agtagccttc ccccttggcc gtgggcaggc cctaactcac tgtcgctttg gagttgaggt
2341 gtcttttttt tttctttctt tagttcctgt attctaaaca ttagtaaaaa taaatgtttt
2401 tacacagaaa aaaaaaaaaa aaa
//