LOCUS BC014791 672 bp mRNA linear HUM 12-OCT-2007
DEFINITION Homo sapiens Sjogren syndrome/scleroderma autoantigen 1, mRNA (cDNA
clone MGC:8951 IMAGE:3857068), complete cds.
ACCESSION BC014791
VERSION BC014791.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 672)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 672)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC014791.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: a Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453837.
FEATURES Location/Qualifiers
source 1..672
/db_xref="H-InvDB:HIT000036859"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8951 IMAGE:3857068"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..672
/gene="SSSCA1"
/gene_synonym="p27"
/db_xref="GeneID:10534"
/db_xref="HGNC:HGNC:11328"
/db_xref="MIM:606044"
CDS 20..619
/gene="SSSCA1"
/gene_synonym="p27"
/codon_start=1
/product="Sjogren syndrome/scleroderma autoantigen 1"
/protein_id="AAH14791.1"
/db_xref="GeneID:10534"
/db_xref="HGNC:HGNC:11328"
/db_xref="MIM:606044"
/translation="MALNGAEVDDFSWEPPTEAETKVLQARRERQDRISRLMGDYLLR
GYRMLGETCADCGTILLQDKQRKIYCVACQELDSDVDKDNPALNAQAALSQAREHQLA
SASELPLGSRPAPQPPVPRPEHCEGAAAGLKAAQGPPAPAVPPNTDVMACTQTALLQK
LTWASAELGSSTSLETSIQLCGLIRACAEALRSLQQLQH"
BASE COUNT 160 a 215 c 190 g 107 t
ORIGIN
1 cggcggtgac aacggcaaca tggccctgaa cggagctgaa gtcgacgact tctcctggga
61 gcccccgact gaggcggaga cgaaggtgct gcaggcgcga cgggagcggc aagatcgcat
121 ctcccggctc atgggcgact atctgctgcg cggttaccgc atgctgggcg agacgtgtgc
181 ggactgcggg acgatcctcc tccaagacaa acagcggaaa atctactgcg tggcttgtca
241 ggaactcgac tcagacgtgg ataaagataa tcccgctctg aatgcccagg ctgccctctc
301 ccaagctcgg gagcaccagc tggcctcagc ctcagagctc cccctgggct ctcgacctgc
361 gccccagccc ccagtacctc gtccggagca ctgtgaggga gctgcagcag gactcaaggc
421 agcccagggg ccacctgctc ctgctgtgcc tccaaataca gatgtcatgg cctgcacaca
481 gacagccctc ttgcagaagc tgacctgggc ctctgctgaa ctgggctcta gcacctccct
541 ggagactagc atccagctgt gtggccttat ccgcgcatgt gcggaggccc tgcgcagcct
601 gcagcagcta cagcactaag agaagcccct gagaaaaacc ctctagaaaa acaaaaaaaa
661 aaaaaaaaaa aa
//