LOCUS BC014662 2874 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SCY1-like 3 (S. cerevisiae), mRNA (cDNA clone
MGC:23025 IMAGE:4852719), complete cds.
ACCESSION BC014662
VERSION BC014662.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2874)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2874)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: c Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281932.
FEATURES Location/Qualifiers
source 1..2874
/db_xref="H-InvDB:HIT000036841"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23025 IMAGE:4852719"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2874
/gene="SCYL3"
/gene_synonym="PACE-1"
/gene_synonym="PACE1"
/gene_synonym="RP1-97P20.2"
/db_xref="GeneID:57147"
/db_xref="HGNC:HGNC:19285"
/db_xref="MIM:608192"
CDS 160..2226
/gene="SCYL3"
/gene_synonym="PACE-1"
/gene_synonym="PACE1"
/gene_synonym="RP1-97P20.2"
/codon_start=1
/product="SCY1-like 3 (S. cerevisiae)"
/protein_id="AAH14662.1"
/db_xref="GeneID:57147"
/db_xref="HGNC:HGNC:19285"
/db_xref="MIM:608192"
/translation="MGSENSALKSYTLREPPFTLPSGLAVYPAVLQDGKFASVFVYKR
ENEDKVNKAAKHLKTLRHPCLLRFLSCTVEADGIHLVTERVQPLEVALETLSSAEVCA
GIYDILLALIFLHDRGHLTHNNVCLSSVFVSEDGHWKLGGMETVCKVSQATPEFLRSI
QSIRDPASIPPEEMSPEFTTLPECHGHARDAFSFGTLVESLLTILNEQVSADVLSSFQ
QTLHSTLLNPIPKCRPALCTLLSHDFFRNDFLEVVNFLKSLTLKSEEEKTEFFKFLLD
RVSCLSEELIASRLVPLLLNQLVFAEPVAVKSFLPYLLGPKKDHAQGETPCLLSPALF
QSRVIPVLLQLFEVHEEHVRMVLLSHIEAYVEHFTQEQLKKVILPQVLLGLRDTSDSI
VAITLHSLAVLVSLLGPEVVVGGERTKIFKRTAPSFTKNTDLSLEGDPFSQPIKFPIN
GLSDVKNTSEDSENFPSSSKKSEEWPDWSEPEEPENQTVNIQIWPREPCDDVKSQCTT
LDVEESSWDDCEPSSLDTKVNPGGGITATKPVTSAEQKPIPALLSLTEESMPWKSSLP
QKISLVQRGDDADQIEPPKVSSQERPLKVPSELGLGEEFTIQVKKKPVKDPEMDWFAD
MIPEIKPSAAFLILPELRTEMVPKKDDVSPVMQFSSKFAAAEITEGEAEGWEEEGELN
WEDNNW"
BASE COUNT 818 a 601 c 663 g 792 t
ORIGIN
1 gtagtggcca cagccttaca ggcaggcagg ggtggttggt gtcaacaggg gggccaacag
61 ggtaccagag ccaagaccct cggcctcctc ccccgccgcc ttcctgcaga tctgcttggc
121 tttgaggaag agtggcagta ctgcctcact gcataaggga tgggatcaga gaacagtgct
181 ttaaagagct atacactgag agaaccacca tttaccttac cctctggact tgctgtttat
241 cccgctgtac tgcaagatgg caaatttgct tcagtttttg tgtataagag agaaaatgaa
301 gacaaggtta ataaagctgc caagcatttg aagacacttc gtcacccttg cttgctaaga
361 tttttatctt gtactgtgga agcggatggc attcatcttg tcactgagcg agtacagccc
421 ctggaagtgg ctttggaaac attgtcttct gcagaggtct gtgctgggat ctatgacata
481 ttgctggctc ttatcttcct tcatgacaga ggacacctaa cacacaataa tgtctgttta
541 tcatctgtgt ttgtgagtga agatggacac tggaagctag gaggaatgga aactgtttgt
601 aaagtttctc aggccacacc agagtttctg aggagtattc agtcaataag agacccagca
661 tctatccctc ctgaagagat gtctccagaa ttcacaactc tcccagagtg tcatggacat
721 gcccgggatg ccttttcatt tggaacattg gtggaaagtt tgctcacaat cttaaatgaa
781 caggtttcag cggatgttct ctccagcttt caacagacct tgcactcaac tttgctgaat
841 cccattccaa aatgtcggcc agcgctctgc accttactat ctcatgactt cttcagaaat
901 gattttctgg aagttgtgaa tttcttgaaa agtttaacat tgaagagtga agaggagaaa
961 acggaattct ttaaatttct gctggacaga gtcagctgct tgtcagagga attgatagct
1021 tcaaggttgg tgcctcttct gcttaatcag ttggtgtttg cagagccagt ggctgttaag
1081 agttttcttc cttatctgct tggccccaaa aaagatcatg cgcagggaga aactccttgc
1141 ttgctctcac cagccctgtt ccagtcacgg gtgatccccg tgcttctcca gttgtttgaa
1201 gttcatgaag agcatgtgcg gatggtgctg ctgtctcaca tcgaggccta cgtggagcac
1261 ttcactcagg agcagctgaa gaaagtcatc ttgccacagg ttttgctggg cctgcgtgat
1321 actagtgatt ccattgtggc aattactctg catagcctag cagtgctggt ctctctgctt
1381 ggaccagagg tggttgtggg aggagaacga accaagatct tcaaacgcac tgccccaagt
1441 tttactaaaa atactgacct ttctctagaa ggtgatccat tttctcagcc tattaaattt
1501 cccataaacg gactctcaga tgtaaaaaat acttcggagg acagtgaaaa cttcccatca
1561 agttctaaaa agtctgagga gtggcctgac tggagtgaac ctgaggagcc tgaaaatcaa
1621 actgtcaaca tacagatttg gcctagagaa ccttgtgatg atgtcaagtc ccagtgcact
1681 accttggatg tggaagagtc atcttgggat gactgcgagc ccagcagctt agatactaaa
1741 gtaaacccag gaggtggaat cactgctaca aaacctgtta cctcagcgga gcagaagcct
1801 attcctgctt tgctttcact cactgaagag tctatgcctt ggaaatcaag cttaccccaa
1861 aagattagcc ttgtacaaag gggggatgac gcagaccaaa tcgagccgcc aaaagtgtca
1921 tcacaagaaa ggccccttaa ggttccatca gaacttggtt taggagagga attcaccatt
1981 caagtaaaaa agaagccagt aaaagatcct gagatggatt ggtttgctga tatgatccca
2041 gaaattaagc cttctgctgc ttttcttata ttacctgaac tgaggacaga aatggtccca
2101 aaaaaggatg atgtctcccc agtgatgcag ttttcctcaa aatttgctgc agcagaaatt
2161 actgagggag aggctgaagg ctgggaagaa gaaggggagc tgaactggga agataataac
2221 tggtgacaat agatgtgagt taaactttag gaaaaaggtt tccctttttt taaaaaaaat
2281 caatacctca aaagcaggct ttgggacaag aaaaccccaa agtggcctgc ttttcccatc
2341 ccaggagctc attatccagt ctgtgccaac tgaagtagga gactgactgt gagtgctggc
2401 taaaagccct gggtggtgag gctcacagta ctggtttcca ggaggaagag cctttgtgca
2461 tttgactgag gccagtttct atgaagagca agtagctgag gagaggtcga atttactgct
2521 ttttccagga caattccgga agtaaagaaa atgtaattca agctggttag cttaattttg
2581 tgccattctt ttctttaaca taagagtaag ctctattatg aaatacaact ttaaaaaatt
2641 ttagctataa attatataaa tgattttaaa ttgctgaggt ttccttaggc agcttattta
2701 tttgtttaca gttagactat ctgagtaaat ggttctttgt ggacctaggc agttcctgac
2761 tgttccacat gtagtacatt gtaccaaagt tcttaataag aatattcccc acaatcctgt
2821 tctctaaatg tcaaataaag attattttca ctagaaaaaa aaaaaaaaaa aaaa
//