LOCUS BC014659 2583 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 44, member 4, mRNA (cDNA clone
MGC:20525 IMAGE:4644272), complete cds.
ACCESSION BC014659
VERSION BC014659.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2583)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2583)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: m Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13376867.
FEATURES Location/Qualifiers
source 1..2583
/db_xref="H-InvDB:HIT000036839_06"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20525 IMAGE:4644272"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2583
/gene="SLC44A4"
/gene_synonym="CTL4"
/gene_synonym="FLJ14491"
/gene_synonym="NG22"
/db_xref="GeneID:80736"
/db_xref="HGNC:HGNC:13941"
/db_xref="MIM:606107"
CDS 6..2135
/gene="SLC44A4"
/gene_synonym="CTL4"
/gene_synonym="FLJ14491"
/gene_synonym="NG22"
/codon_start=1
/product="solute carrier family 44, member 4"
/protein_id="AAH14659.1"
/db_xref="GeneID:80736"
/db_xref="HGNC:HGNC:13941"
/db_xref="MIM:606107"
/translation="MGGKQRDEDDEAYGKPVKYDPSFRGPIKNRSCTDVICCVLFLLF
ILGYIVVGIVAWLYGDPRQVLYPRNSTGAYCGMGENKDKPYLLYFNIFSCILSSNIIS
VAENGLQCPTPQVCVSSCPEDPWTVEKNEFSQTVGEVFYTKNRNFCLPGVPWNMTVIT
SLQQELCPSFLLPSAPALGRCFPWTNITPPALPGITNDTTIQQGISGLIDSLNARDIS
VKIFEDFAQSWYWILVALGVALVLSLLFILLLRLVAGPLVLVLILGVLGVLAYGIYYC
WEEYRVLRDKGASISQLGFTTNLSAYQSVQETWLAALIVLAVLEAILLLVLIFLRQRI
RIAIALLKEASKAVGQMMSTMFYPLVTFVLLLICIAYWAMTALYLATSGQPQYVLWAS
NISSPGCEKVPINTSCNPTAHLVNSSCPGLMCVFQGYSSKGLIQRSVFNLQIYGVLGL
FWTLNWVLALGQCVLAGAFASFYWAFHKPQDIPTFPLISAFIRTLRYHTGSLAFGALI
LTLVQIARVILEYIDHKLRGVQNPVARCIMCCFKCCLWCLEKFIKFLNRNAYIMIAIY
GKNFCVSAKNAFMLLMRNIVRVVVLDKVTDLLLFFGKLLVVGGVGVLSFFFFSGRIPG
LGKDFKSPHLNYWLPIMTSILGAYVIASGFFSVFGMCVDTLFLCFLEDLERNNGSLDR
PYYMSKSLLKILGKKNEAPPDNKKRKK"
BASE COUNT 568 a 755 c 654 g 606 t
ORIGIN
1 gagccatggg gggaaagcag cgggacgagg atgacgaggc ctacgggaag ccagtcaaat
61 acgacccctc ctttcgaggc cccatcaaga acagaagctg cacagatgtc atctgctgcg
121 tcctcttcct gctcttcatt ctaggttaca tcgtggtggg gattgtggcc tggttgtatg
181 gagacccccg gcaagtcctc taccccagga actctactgg ggcctactgt ggcatggggg
241 agaacaaaga taagccgtat ctcctgtact tcaacatctt cagctgcatc ctgtccagca
301 acatcatctc agttgctgag aacggcctac agtgccccac accccaggtg tgtgtgtcct
361 cctgcccgga ggacccatgg actgtggaaa aaaacgagtt ctcacagact gttggggaag
421 tcttctatac aaaaaacagg aacttttgtc tgccaggggt accctggaat atgacggtga
481 tcacaagcct gcaacaggaa ctctgcccca gtttcctcct cccctctgct ccagctctgg
541 gacgctgctt tccatggacc aacattactc caccggcgct cccagggatc accaatgaca
601 ccaccataca gcaggggatc agcggtctta ttgacagcct caatgcccga gacatcagtg
661 ttaagatctt tgaagatttt gcccagtcct ggtattggat tcttgttgcc ctgggggtgg
721 ctctggtctt gagcctactg tttatcttgc ttctgcgcct ggtggctggg cccctggtgc
781 tggtgctgat cctgggagtg ctgggcgtgc tggcatatgg catctactac tgctgggagg
841 agtaccgagt gctgcgggac aagggcgcct ccatctccca gctgggtttc accaccaacc
901 tcagtgccta ccagagcgtg caggagacct ggctggccgc cctgatcgtg ttggcggtgc
961 ttgaagccat cctgctgctg gtgctcatct tcctgcggca gcggattcgt attgccatcg
1021 ccctcctgaa ggaggccagc aaggctgtgg gacagatgat gtctaccatg ttctacccac
1081 tggtcacctt tgtcctcctc ctcatctgca ttgcctactg ggccatgact gctctgtacc
1141 tggctacatc ggggcaaccc cagtatgtgc tctgggcatc caacatcagc tcccccggct
1201 gtgagaaagt gccaataaat acatcatgca accccacggc ccaccttgtg aactcctcgt
1261 gcccagggct gatgtgcgtc ttccagggct actcatccaa aggcctaatc caacgttctg
1321 tcttcaatct gcaaatctat ggggtcctgg ggctcttctg gacccttaac tgggtactgg
1381 ccctgggcca atgcgtcctc gctggagcct ttgcctcctt ctactgggcc ttccacaagc
1441 cccaggacat ccctaccttc cccttaatct ctgccttcat ccgcacactc cgttaccaca
1501 ctgggtcatt ggcatttgga gccctcatcc tgacccttgt gcagatagcc cgggtcatct
1561 tggagtatat tgaccacaag ctcagaggag tgcagaaccc tgtagcccgc tgcatcatgt
1621 gctgtttcaa gtgctgcctc tggtgtctgg aaaaatttat caagttccta aaccgcaatg
1681 catacatcat gatcgccatc tacgggaaga atttctgtgt ctcagccaaa aatgcgttca
1741 tgctactcat gcgaaacatt gtcagggtgg tcgtcctgga caaagtcaca gacctgctgc
1801 tgttctttgg gaagctgctg gtggtcggag gcgtgggggt cctgtccttc ttttttttct
1861 ccggtcgcat cccggggctg ggtaaagact ttaagagccc ccacctcaac tattggctgc
1921 ccatcatgac ctccatcctg ggggcctatg tcatcgccag cggcttcttc agcgttttcg
1981 gcatgtgtgt ggacacgctc ttcctctgct tcctggaaga cctggagcgg aacaacggct
2041 ccctggaccg gccctactac atgtccaaga gccttctaaa gattctgggc aagaagaacg
2101 aggcgccccc ggacaacaag aagaggaaga agtgacagct ccggccctga tccaggactg
2161 caccccaccc ccaccgtcca gccatccaac ctcacttcgc cttacaggtc tccattttgt
2221 ggtaaaaaaa ggttttaggc caggcgccgt ggctcacgcc tgtaatccaa cactttgaga
2281 ggctgaggcg ggcggatcac ctgagtcagg agttcgagac cagcctggcc aacatggtga
2341 aacctccgtc tctattaaaa atacaaaaat tagccgagag tggtggcatg cacctgtcat
2401 cccagctact cgggaggctg aggcaggaga atcgcttgaa cccgggaggc agaggttgca
2461 gtgagccgag atcgcgccac tgcactccaa cctgggtgac agactctgtc tccaaaacaa
2521 aacaaacaaa caaaaagatt ttattaaaga tattttgtta actcaaaaaa aaaaaaaaaa
2581 aaa
//