LOCUS BC014658 2256 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 9 open reading frame 82, mRNA (cDNA clone
MGC:20431 IMAGE:4648932), complete cds.
ACCESSION BC014658
VERSION BC014658.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2256)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2256)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: n Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48976053.
FEATURES Location/Qualifiers
source 1..2256
/db_xref="H-InvDB:HIT000036838"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20431 IMAGE:4648932"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2256
/gene="C9orf82"
/gene_synonym="FLJ13657"
/gene_synonym="RP11-337A23.1"
/db_xref="GeneID:79886"
/db_xref="HGNC:HGNC:25834"
CDS 90..1175
/gene="C9orf82"
/gene_synonym="FLJ13657"
/gene_synonym="RP11-337A23.1"
/codon_start=1
/product="chromosome 9 open reading frame 82"
/protein_id="AAH14658.1"
/db_xref="GeneID:79886"
/db_xref="HGNC:HGNC:25834"
/translation="MTGKKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCG
SAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQE
TKYILPTLEKELFLAEHSDLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQ
KMLPDVLKNCSIEEIKKLCQEQLELLSKKKILKILEGDNGMDSDMEEEADDGSKMGSD
LVSQQDICIDSASSVRENKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAA
PEAPENTVQSEAGQIDDLEKDIEKSVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQ
QLELLELEMRARAIKALMKAGDIKKPA"
BASE COUNT 726 a 386 c 494 g 650 t
ORIGIN
1 ccagtgcctg ccgcccacgg ccgcaggagt cgggcttcgg tcgcaccaga gacagcggac
61 tttcctccga tggttgcagc agagggatca tgacggggaa aaagtcctcc cgggagaaac
121 ggcgcaaacg tagcagtcag gaggcggccg cagcgctcgc ggccccggac atcgtacccg
181 cgttggccag cggcagcagt ggaagcacta gcggctgcgg gagcgccggg ggctgcggga
241 gcgtcagctg ctgtgggaac gccaatttta gtggaagtgt caccggcggt gggagcggcg
301 gcagctgttg gggcgggagc agcgtggagc gcagcgagcg ccggaagcgg aggagtaccg
361 actcttccag cgtctcgggc tccttgcagc aggaaactaa atatattttg ccaactttgg
421 aaaaagaatt attcttggca gagcacagtg accttgaaga aggtggactg gacctgactg
481 tgtcattgaa accagttagt ttctatatat cagacaaaaa agaaatgctt cagcagtgct
541 tctgtattat aggagagaaa aagttacaga agatgcttcc tgatgtgtta aagaactgtt
601 caatagaaga aattaaaaaa ctatgccagg aacagttaga gctcctgtct aaaaaaaaaa
661 ttttgaagat tcttgagggt gacaatggaa tggactctga tatggaagag gaagcagatg
721 atggttctaa gatgggatct gatttagtca gtcagcaaga catctgtata gattctgctt
781 catccgtgag agagaataag caacctgaag gtttggaatt aaaacaagga aaaggggaag
841 atagtgatgt actcagtata aatgcagatg cttatgacag cgacatagaa ggcccatgca
901 acgaagaagc agctgctccc gaggcaccag aaaatacagt ccaaagtgaa gctggtcaga
961 tagatgacct ggagaaagac attgagaaaa gtgtgaatga gattctagga ctggcagagt
1021 ctagcccaaa cgaacccaaa gcagccaccc tggctgttcc tccaccagaa gatgttcaac
1081 cttctgcaca gcaactggag ctgctagaac ttgagatgag ggcaagagcg attaaagccc
1141 taatgaaagc tggtgatata aaaaagccag cctaggtatt taacttgatt ttgaatttta
1201 ggtatgtttg aacaaagcca catcatttaa ttttgtatct aaaatttatt tggggtctta
1261 tatgttattt ctcatgtaac ccttattagg actcatttta gccctaaatt acctgtggct
1321 gtttcttttt atttttttga ctacttttat attataaatg tgtgttactg tcttatgaat
1381 tcatggcaat atagttggat agcctggata ctttgttaga tgagtattta gctgtgtctg
1441 caaatcttaa aagccattag caaagagtcg tggtattttt ttctttattt ttaaatgttt
1501 gggcaccaaa cctaaaagca aaagattgac gaagcatgtt tctcttaagg ctacttgtat
1561 tttacaatac aatattaaat tatttaattt gagaaattta gttttgctta tatgcacttt
1621 ttaaatatat actattttga agattcctta tgtaaatgca aatttcctag ttaaaactga
1681 ataacagaga tctgaaatga ctgagaaaaa cttttttatt aaaggaagga attaatttaa
1741 ggcaattttt aactatgtag aactaattgc ccatgtttaa ttatagcaga cacgccattc
1801 taacaggtat ttgataccat tggatgcatt attctaggtt ttttctttaa taaaaatgga
1861 acaagttttc atttacattc caagctgtca ggaaatgaag aatattttat tatctaggat
1921 tttatctgat gtagttgctt aaagatctga tgtgctataa ttccatgaat cagaaataat
1981 aaaatgctat cattctggat ctgaagactt ttgatacttt ttcaaaagca aaattaattt
2041 caggaacctt tgataagttg ttgttataat taatctaatt ttgtatagtt tttgtaaata
2101 aattaccatc cttccacaat tagggatgct tttatccccc catcactaat tgcagttgtt
2161 tgataccaaa ataaatttac gtagagatcc ttaacttaaa ataaattaat tttttcaaaa
2221 aacataaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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