LOCUS BC014657 1213 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens synapse associated protein 1, SAP47 homolog (Drosophila), mRNA (cDNA clone MGC:20415 IMAGE:4640905), complete cds. ACCESSION BC014657 VERSION BC014657.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1213) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1213) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: l Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923854. FEATURES Location/Qualifiers source 1..1213 /db_xref="H-InvDB:HIT000036837" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20415 IMAGE:4640905" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1213 /gene="SYAP1" /gene_synonym="FLJ14495" /gene_synonym="PRO3113" /db_xref="GeneID:94056" /db_xref="HGNC:HGNC:16273" CDS 62..1120 /gene="SYAP1" /gene_synonym="FLJ14495" /gene_synonym="PRO3113" /codon_start=1 /product="synapse associated protein 1, SAP47 homolog (Drosophila)" /protein_id="AAH14657.1" /db_xref="GeneID:94056" /db_xref="HGNC:HGNC:16273" /translation="MFRGLSSWLGLQQPVAGGGQPNGDALPEQPSETVAESAEEELQQ AGDQELLHQAKDFGNYLFNFASAATKKITESVAETAQTIKKSVEEGKIDGIIDKTIIG DFQKEQKKFVEEQHTKKSEAAVPPWVDTNDEETIQQQILALSADKRNFLRDPPAGVQF NFDFDQMYPVALVMLQEDELLSKMRFALVPKLVKEEVFWRNYFYRVSLIKQSAQLTAL AAQQQAAGKEEKSNGREQDLPLAEAVRPKTPPVVIKSQLKTQEDEEEISTSPGVSEFV SDAFDACNLNQEDLRKEMEQLVLDKKQEETAVLEEDSADWEKELQQELQEYEVVTESE KRDENWDKEIEKMLQEEN" BASE COUNT 393 a 253 c 323 g 244 t ORIGIN 1 ggcaaccagt gctcgctgcg gtctctgggg atcgggaccg cggcggcggc ccgcgagcgg 61 gatgttccgg ggcttgagca gttggttggg cttgcagcag ccggtggcag gcggtgggca 121 gcccaatgga gatgctctac ccgagcagcc gtccgagacg gtggctgagt ctgcggagga 181 ggagctgcag caagcgggag accaggagct cctccaccag gccaaagact tcggcaacta 241 tttatttaac tttgcatctg ctgccacaaa aaagataact gaatcagttg ctgaaacagc 301 acaaacaata aagaaatccg tagaagaagg aaaaatagat ggcatcattg acaagacaat 361 tataggagat tttcagaagg aacagaaaaa atttgttgaa gagcaacata caaagaagtc 421 agaagcagct gtgcccccat gggttgacac taacgatgaa gaaacaattc aacaacaaat 481 tttggcctta tcagctgaca agaggaattt ccttcgtgac cctccggctg gcgtgcaatt 541 taatttcgac tttgatcaga tgtaccccgt ggccctggtc atgctccagg aggatgagct 601 gctaagcaag atgagatttg ccctcgttcc taaacttgtg aaggaagaag tgttctggag 661 gaactacttt taccgcgtct ccctgattaa gcagtcagcc cagctcacgg ccctggctgc 721 ccaacagcag gccgcaggga aggaggagaa gagcaatggc agagagcaag atttgccgct 781 ggcagaggca gtacggccca aaacgccacc cgttgtaatc aaatctcagc ttaaaactca 841 agaggatgag gaagaaattt ctactagccc aggtgtttct gagtttgtca gtgatgcctt 901 cgatgcctgt aacctaaatc aggaagatct aaggaaagaa atggagcaac tagtgcttga 961 caaaaagcaa gaggagacag ccgtactgga agaggattct gcagattggg aaaaagaact 1021 gcagcaggaa cttcaagaat atgaagtggt gacagaatct gaaaaacgag atgaaaactg 1081 ggataaggaa atagagaaaa tgcttcaaga ggaaaattag ctgttcctga aatagaagaa 1141 taatccttaa cagtctgcaa actgacatta aattctagat gttgacaatt actgaaaaaa 1201 aaaaaaaaaa aaa //