LOCUS BC014657 1213 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens synapse associated protein 1, SAP47 homolog
(Drosophila), mRNA (cDNA clone MGC:20415 IMAGE:4640905), complete
cds.
ACCESSION BC014657
VERSION BC014657.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1213)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1213)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: l Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923854.
FEATURES Location/Qualifiers
source 1..1213
/db_xref="H-InvDB:HIT000036837"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20415 IMAGE:4640905"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1213
/gene="SYAP1"
/gene_synonym="FLJ14495"
/gene_synonym="PRO3113"
/db_xref="GeneID:94056"
/db_xref="HGNC:HGNC:16273"
CDS 62..1120
/gene="SYAP1"
/gene_synonym="FLJ14495"
/gene_synonym="PRO3113"
/codon_start=1
/product="synapse associated protein 1, SAP47 homolog
(Drosophila)"
/protein_id="AAH14657.1"
/db_xref="GeneID:94056"
/db_xref="HGNC:HGNC:16273"
/translation="MFRGLSSWLGLQQPVAGGGQPNGDALPEQPSETVAESAEEELQQ
AGDQELLHQAKDFGNYLFNFASAATKKITESVAETAQTIKKSVEEGKIDGIIDKTIIG
DFQKEQKKFVEEQHTKKSEAAVPPWVDTNDEETIQQQILALSADKRNFLRDPPAGVQF
NFDFDQMYPVALVMLQEDELLSKMRFALVPKLVKEEVFWRNYFYRVSLIKQSAQLTAL
AAQQQAAGKEEKSNGREQDLPLAEAVRPKTPPVVIKSQLKTQEDEEEISTSPGVSEFV
SDAFDACNLNQEDLRKEMEQLVLDKKQEETAVLEEDSADWEKELQQELQEYEVVTESE
KRDENWDKEIEKMLQEEN"
BASE COUNT 393 a 253 c 323 g 244 t
ORIGIN
1 ggcaaccagt gctcgctgcg gtctctgggg atcgggaccg cggcggcggc ccgcgagcgg
61 gatgttccgg ggcttgagca gttggttggg cttgcagcag ccggtggcag gcggtgggca
121 gcccaatgga gatgctctac ccgagcagcc gtccgagacg gtggctgagt ctgcggagga
181 ggagctgcag caagcgggag accaggagct cctccaccag gccaaagact tcggcaacta
241 tttatttaac tttgcatctg ctgccacaaa aaagataact gaatcagttg ctgaaacagc
301 acaaacaata aagaaatccg tagaagaagg aaaaatagat ggcatcattg acaagacaat
361 tataggagat tttcagaagg aacagaaaaa atttgttgaa gagcaacata caaagaagtc
421 agaagcagct gtgcccccat gggttgacac taacgatgaa gaaacaattc aacaacaaat
481 tttggcctta tcagctgaca agaggaattt ccttcgtgac cctccggctg gcgtgcaatt
541 taatttcgac tttgatcaga tgtaccccgt ggccctggtc atgctccagg aggatgagct
601 gctaagcaag atgagatttg ccctcgttcc taaacttgtg aaggaagaag tgttctggag
661 gaactacttt taccgcgtct ccctgattaa gcagtcagcc cagctcacgg ccctggctgc
721 ccaacagcag gccgcaggga aggaggagaa gagcaatggc agagagcaag atttgccgct
781 ggcagaggca gtacggccca aaacgccacc cgttgtaatc aaatctcagc ttaaaactca
841 agaggatgag gaagaaattt ctactagccc aggtgtttct gagtttgtca gtgatgcctt
901 cgatgcctgt aacctaaatc aggaagatct aaggaaagaa atggagcaac tagtgcttga
961 caaaaagcaa gaggagacag ccgtactgga agaggattct gcagattggg aaaaagaact
1021 gcagcaggaa cttcaagaat atgaagtggt gacagaatct gaaaaacgag atgaaaactg
1081 ggataaggaa atagagaaaa tgcttcaaga ggaaaattag ctgttcctga aatagaagaa
1141 taatccttaa cagtctgcaa actgacatta aattctagat gttgacaatt actgaaaaaa
1201 aaaaaaaaaa aaa
//