LOCUS BC014645 1327 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens paired related homeobox 2, mRNA (cDNA clone MGC:19843
IMAGE:4553935), complete cds.
ACCESSION BC014645
VERSION BC014645.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1327)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1327)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38505203.
FEATURES Location/Qualifiers
source 1..1327
/db_xref="H-InvDB:HIT000036829"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:19843 IMAGE:4553935"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1327
/gene="PRRX2"
/gene_synonym="MGC19843"
/gene_synonym="PMX2"
/gene_synonym="PRX2"
/db_xref="GeneID:51450"
/db_xref="HGNC:HGNC:21338"
/db_xref="MIM:604675"
CDS 228..989
/gene="PRRX2"
/gene_synonym="MGC19843"
/gene_synonym="PMX2"
/gene_synonym="PRX2"
/codon_start=1
/product="paired related homeobox 2"
/protein_id="AAH14645.1"
/db_xref="GeneID:51450"
/db_xref="HGNC:HGNC:21338"
/db_xref="MIM:604675"
/translation="MDSAAAAFALDKPALGPGPPPPPPALGPGDCAQARKNFSVSHLL
DLEEVAAAGRLAARPGARAEAREGAAREPSGGSSGSEAAPQDGECPSPGRGSAAKRKK
KQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR
RNERAMLASRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGS
SGPATPGVNMANSIASLRLKAKEFSLHHSQVPTVN"
BASE COUNT 249 a 463 c 441 g 174 t
ORIGIN
1 cgcagcgcgt gcaccagcgg ctccggagcg agcggccgtg gctgagaagg ggagggcgga
61 aagtttgttt ccccgacgtc agcgccgggc gggccgcgag gctaggaggc ggcgggagct
121 gggcagagcg cggggcggcc ggggctctcg ctccgacccg cgcccgcgac ccttcctggg
181 acccgagccc gagacccccg ccggcccccc cggggccgct cgcgggcatg gacagcgcgg
241 ccgccgcctt cgccctggac aagccggcgc tgggcccggg gccgccgccg cctccacccg
301 cgctggggcc cggcgactgc gcccaggcgc gcaagaactt ctcggtgagc cacctcctgg
361 acctggaaga ggtggcggcg gccgggcggc tggcggcgcg ccccggggcc agggccgagg
421 cgcgggaggg cgcagcacgg gagccgtccg ggggcagcag cggcagcgag gcggcgccgc
481 aggatggtga gtgtcccagc ccggggcgcg gtagcgccgc caagcggaag aagaagcagc
541 ggcggaaccg caccacgttc aacagcagcc aactgcaggc gctggagcgc gtgttcgagc
601 gcacgcacta ccccgacgcc tttgtgcgcg aggagcttgc ccggcgcgtc aacctcagcg
661 aggcgcgcgt tcaggtctgg tttcagaacc gccgcgccaa gttccgcagg aatgaaaggg
721 ccatgctggc cagccgctct gcctcgctgc tcaagtccta cagccaggag gccgccatcg
781 agcagcccgt ggctccccgg cccaccgccc tgagtccaga ttatctctcc tggacagcct
841 cgtcccccta cagcacagtg ccaccctaca gccctgggag ctcaggcccc gcaaccccag
901 gggtcaacat ggccaacagc atcgccagcc tccgtctcaa ggccaaggag ttcagcctgc
961 accacagcca ggtgcctacg gtgaactgaa gtccagtccc accaggaccc agacgcctcc
1021 ctgggtggac agcaatagaa aagggggcag acgcccagga agtgaccttc tcctggatga
1081 gctctcctgg cccgtctgtc cagcctggac tcccgagccc acgaggctgt tgaggcccct
1141 gcagccgggc ccagctcttc tgtccttggc caccagagac tgcagcccac aacccttgga
1201 ggggttgggc cggaaggtgg aagagcctgc caaggacctc atttagtttg tgtattaaaa
1261 ccaaaaagct tttgtcttta agaaataaaa ccattttttt aagccccaaa aaaaaaaaaa
1321 aaaaaaa
//