LOCUS BC014645 1327 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens paired related homeobox 2, mRNA (cDNA clone MGC:19843 IMAGE:4553935), complete cds. ACCESSION BC014645 VERSION BC014645.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1327) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1327) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 29 Row: c Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38505203. FEATURES Location/Qualifiers source 1..1327 /db_xref="H-InvDB:HIT000036829" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:19843 IMAGE:4553935" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_46" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1327 /gene="PRRX2" /gene_synonym="MGC19843" /gene_synonym="PMX2" /gene_synonym="PRX2" /db_xref="GeneID:51450" /db_xref="HGNC:HGNC:21338" /db_xref="MIM:604675" CDS 228..989 /gene="PRRX2" /gene_synonym="MGC19843" /gene_synonym="PMX2" /gene_synonym="PRX2" /codon_start=1 /product="paired related homeobox 2" /protein_id="AAH14645.1" /db_xref="GeneID:51450" /db_xref="HGNC:HGNC:21338" /db_xref="MIM:604675" /translation="MDSAAAAFALDKPALGPGPPPPPPALGPGDCAQARKNFSVSHLL DLEEVAAAGRLAARPGARAEAREGAAREPSGGSSGSEAAPQDGECPSPGRGSAAKRKK KQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR RNERAMLASRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGS SGPATPGVNMANSIASLRLKAKEFSLHHSQVPTVN" BASE COUNT 249 a 463 c 441 g 174 t ORIGIN 1 cgcagcgcgt gcaccagcgg ctccggagcg agcggccgtg gctgagaagg ggagggcgga 61 aagtttgttt ccccgacgtc agcgccgggc gggccgcgag gctaggaggc ggcgggagct 121 gggcagagcg cggggcggcc ggggctctcg ctccgacccg cgcccgcgac ccttcctggg 181 acccgagccc gagacccccg ccggcccccc cggggccgct cgcgggcatg gacagcgcgg 241 ccgccgcctt cgccctggac aagccggcgc tgggcccggg gccgccgccg cctccacccg 301 cgctggggcc cggcgactgc gcccaggcgc gcaagaactt ctcggtgagc cacctcctgg 361 acctggaaga ggtggcggcg gccgggcggc tggcggcgcg ccccggggcc agggccgagg 421 cgcgggaggg cgcagcacgg gagccgtccg ggggcagcag cggcagcgag gcggcgccgc 481 aggatggtga gtgtcccagc ccggggcgcg gtagcgccgc caagcggaag aagaagcagc 541 ggcggaaccg caccacgttc aacagcagcc aactgcaggc gctggagcgc gtgttcgagc 601 gcacgcacta ccccgacgcc tttgtgcgcg aggagcttgc ccggcgcgtc aacctcagcg 661 aggcgcgcgt tcaggtctgg tttcagaacc gccgcgccaa gttccgcagg aatgaaaggg 721 ccatgctggc cagccgctct gcctcgctgc tcaagtccta cagccaggag gccgccatcg 781 agcagcccgt ggctccccgg cccaccgccc tgagtccaga ttatctctcc tggacagcct 841 cgtcccccta cagcacagtg ccaccctaca gccctgggag ctcaggcccc gcaaccccag 901 gggtcaacat ggccaacagc atcgccagcc tccgtctcaa ggccaaggag ttcagcctgc 961 accacagcca ggtgcctacg gtgaactgaa gtccagtccc accaggaccc agacgcctcc 1021 ctgggtggac agcaatagaa aagggggcag acgcccagga agtgaccttc tcctggatga 1081 gctctcctgg cccgtctgtc cagcctggac tcccgagccc acgaggctgt tgaggcccct 1141 gcagccgggc ccagctcttc tgtccttggc caccagagac tgcagcccac aacccttgga 1201 ggggttgggc cggaaggtgg aagagcctgc caaggacctc atttagtttg tgtattaaaa 1261 ccaaaaagct tttgtcttta agaaataaaa ccattttttt aagccccaaa aaaaaaaaaa 1321 aaaaaaa //