LOCUS BC014641 2099 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ankyrin repeat domain 54, mRNA (cDNA clone MGC:15484
IMAGE:2988073), complete cds.
ACCESSION BC014641
VERSION BC014641.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2099)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2099)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: d Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20270346.
FEATURES Location/Qualifiers
source 1..2099
/db_xref="H-InvDB:HIT000036826"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15484 IMAGE:2988073"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2099
/gene="ANKRD54"
/db_xref="GeneID:129138"
/db_xref="HGNC:HGNC:25185"
CDS 59..961
/gene="ANKRD54"
/codon_start=1
/product="ankyrin repeat domain 54"
/protein_id="AAH14641.1"
/db_xref="GeneID:129138"
/db_xref="HGNC:HGNC:25185"
/translation="MAAAAGDADDEPRSGHSSSEGECAVAPEPLTDAEGLFSFADFGS
ALGGGGAGLSGRASGGAQSPLRYLHVLWQQDAEPRDELRCKIPAGRLRRAARPHRRLG
PTGKEVHALKRLRDSANANDVETVQQLLEDGADPCAADDKGRTALHFASCNGNDQIVQ
LLLDHGADPNQRDGLGNTPLHLAACTNHVPVITTLLRGGARVDALDRAGRTPLHLAKS
KLNILQEGHAQCLEAVRLEVKQIIHMLREYLERLGQHEQRERLDDLCTRLQMTSTKEQ
VDEVTDLLASFTSLSLQMQSMEKR"
BASE COUNT 477 a 611 c 615 g 396 t
ORIGIN
1 gtccgttggt cggtcgggaa cgaggctcag gcggccaggc ccgcgcggag ccgttgccat
61 ggcagccgcc gccggggacg cggacgacga gccgcgctca ggccactcga gctcggaggg
121 cgagtgcgcg gtggcgccgg agccgctgac tgacgctgag ggcctcttct ccttcgctga
181 cttcgggtct gcgctgggcg gcggcggcgc gggcctctcg ggccgggcgt ccggcggggc
241 ccagtcgccg ctgcgctact tgcacgtcct gtggcagcag gatgcggagc cgcgcgacga
301 gctgcgctgc aagatacccg ctggccggct gaggcgcgct gccaggcccc accggcggct
361 cgggcccacg ggcaaggagg tgcacgctct gaagagactg agggactcgg ccaatgccaa
421 tgatgtggaa acagtgcagc agctgctgga agatggcgcg gatccctgtg cagctgatga
481 caagggccgc acagctctac actttgcctc atgcaatggc aatgaccaga ttgtgcagct
541 gctcctggac catggtgctg atcctaacca gcgagatggg ctggggaaca cgccactgca
601 cctggcggcc tgcaccaacc acgttcctgt catcaccaca ctgctacgag gaggggcccg
661 tgtagatgcc ctggaccgag ctggtcgcac acccctgcac ctggccaagt caaagctgaa
721 tatcctgcag gagggccatg cccagtgcct agaggctgtg cgtctggagg tgaagcagat
781 catccatatg ctgagggagt atctggagcg cctagggcaa catgagcagc gagaacgcct
841 ggatgacctc tgcacccgcc tgcagatgac cagtaccaaa gagcaggtgg atgaagtgac
901 tgacctcctg gccagcttca cctccctcag tctgcagatg cagagcatgg agaagaggta
961 gcaagagagg ctccctgcct tcctgccact gccccaccct gccccactgc tgtctcagta
1021 ccaagaaaaa gcccaacatc tgggacttgg agctgcactt gtctggtgag gaccttgccc
1081 tcacccgcac atgccgtggg gcagagatgc tctctctcca cggcctcaga gccactccca
1141 gccacagttt ccagcatctc tgtggacagg gaccacagct cccagcttct tccagttctc
1201 gcagcaccag accagcctct gcagctgcac ttcagctccg cagacctgcg ctatctcagc
1261 agacctcact tgccccatgg ccttcatggc gcgctccagg cctcagaccc ttctctgtgt
1321 tccgtcctgg ccatgggctt gttgcagtca gcaggtgtgg gcttaggcgg gcaccctgtg
1381 gccaggggta ctgcgtgagg ccctcagttg gtcctgtgcc tctcaccagc acttagacag
1441 acacgtcacc agactttcaa ggagatactg cagtgagttt ctctggttgg aaggggaggg
1501 ttggtgagtc ccagacctta aaaatacaag gttaagaggg accccaaagc aaaaaattcc
1561 aacccttttc ctcccagtca ttgaaacacc aaaactatta taccggaggg tgtaatagtt
1621 ttgctgccca gttgtggtag gccagtagtg gcctcccaag atgcccatgt cctaatccca
1681 ggaacctgtc aaaattacct tgtatggcca aaggggcttt gcagatgtaa tgaagttaag
1741 gatctttcgc caggaagatt atcccagctt gttcaggagg gcttgatgtc ctcacccggg
1801 tctgtataac agaagagcag gtgacgggag aggaggttgg aggtgtagcg atggagcagg
1861 aaactggagt tgaggagggc agctcaagcc acagagtcca ggccacctca gagccaggaa
1921 atgcatcctc ccacagagcc ctggaaggcc ccagccctgc tcccacctgg actggctcag
1981 tgaggctaat tttataattc tggctgattt tagaactcta agggaataaa tttgtgttgt
2041 tttaagtcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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