LOCUS BC014623 2061 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens serpin peptidase inhibitor, clade H (heat shock
protein 47), member 1, (collagen binding protein 1), mRNA (cDNA
clone MGC:4258 IMAGE:3030138), complete cds.
ACCESSION BC014623
VERSION BC014623.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2061)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2061)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC014623.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: l Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32454740.
FEATURES Location/Qualifiers
source 1..2061
/db_xref="H-InvDB:HIT000036818"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4258 IMAGE:3030138"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2061
/gene="SERPINH1"
/gene_synonym="AsTP3"
/gene_synonym="gp46"
/gene_synonym="HSP47"
/gene_synonym="PIG14"
/gene_synonym="RA-A47"
/db_xref="GeneID:871"
/db_xref="HGNC:HGNC:1546"
/db_xref="MIM:600943"
CDS 90..1346
/gene="SERPINH1"
/gene_synonym="AsTP3"
/gene_synonym="gp46"
/gene_synonym="HSP47"
/gene_synonym="PIG14"
/gene_synonym="RA-A47"
/codon_start=1
/product="serpin peptidase inhibitor, clade H (heat shock
protein 47), member 1, (collagen binding protein 1)"
/protein_id="AAH14623.1"
/db_xref="GeneID:871"
/db_xref="HGNC:HGNC:1546"
/db_xref="MIM:600943"
/translation="MRSLLLLSAFCLLEAALAAEVKKPAAAAAPGTAEKLSPKAATLA
ERSAGLAFSLYQAMAKDQAVENILVSPVVVASSLGLVSLGGKATTASQAKAVLSAEQL
RDEEVHAGLGELLRSLSNSTARNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSK
INFRDKRSALQSINEWAAQTTDGKLPEVTKDVERTDGALLVNAMFFKPHWDEKFHHKM
VDNRGFMVTRSYTVGVMMMHRTGLYNYYDDEKEKLQIVEMPLAHKLSSLIILMPHHVE
PLERLEKLLTKEQLKIWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNK
ADLSRMSGKKDLYLASVFHATAFELDTDGNPFDQDIYGREELRSPKLFYADHPFIFLV
RDTQSGSLLFIGRLVRPKGDKMRDEL"
BASE COUNT 461 a 612 c 597 g 391 t
ORIGIN
1 gtgtcgcggc tcgagagcga gagtcacgtc ccggcgctag cccagcccga cccaggccca
61 ccgtggtgca cgcaaaccac ttcctggcca tgcgctccct cctgcttctc agcgccttct
121 gcctcctgga ggcggccctg gccgccgagg tgaagaaacc tgcagccgca gcagctcctg
181 gcactgcgga gaagttgagc cccaaggcgg ccacgcttgc cgagcgcagc gccggcctgg
241 ccttcagctt gtaccaggcc atggccaagg accaggcagt ggagaacatc ctggtgtcac
301 ccgtggtggt ggcctcgtcg ctggggctcg tgtcgctggg cggcaaggcg accacggcgt
361 cgcaggccaa ggcagtgctg agcgccgagc agctgcgcga cgaggaggtg cacgccggcc
421 tgggcgagct gctgcgctca ctcagcaact ccacggcgcg caacgtgacc tggaagctgg
481 gcagccgact gtacggaccc agctcagtga gcttcgctga tgacttcgtg cgcagcagca
541 agcagcacta caactgcgag cactccaaga tcaacttccg cgacaagcgc agcgcgctgc
601 agtccatcaa cgagtgggcc gcgcagacca ccgacggcaa gctgcccgag gtcaccaagg
661 acgtggagcg cacggacggc gccctgttag tcaacgccat gttcttcaag ccacactggg
721 atgagaaatt ccaccacaag atggtggaca accgtggctt catggtgact cggtcctata
781 ccgtgggtgt catgatgatg caccggacag gcctctacaa ctactacgac gacgagaagg
841 aaaagctgca aatcgtggag atgcccctgg cccacaagct ctccagcctc atcatcctca
901 tgccccatca cgtggagcct ctcgagcgcc ttgaaaagct gctaaccaaa gagcagctga
961 agatctggat ggggaagatg cagaagaagg ctgttgccat ctccttgccc aagggtgtgg
1021 tggaggtgac ccatgacctg cagaaacacc tggctgggct gggcctgact gaggccattg
1081 acaagaacaa ggccgacttg tcacgcatgt caggcaagaa ggacctgtac ctggccagcg
1141 tgttccacgc caccgccttt gagttggaca cagatggcaa cccctttgac caggacatct
1201 acgggcgcga ggagctgcgc agccccaagc tgttctacgc cgaccacccc ttcatcttcc
1261 tagtgcggga cacccaaagc ggctccctgc tattcattgg gcgcctggtc cggcctaagg
1321 gtgacaagat gcgagacgag ttatagggcc tcagggtgca cacaggatgg caggaggcat
1381 ccaaaggctc ctgagacaca tgggtgctat tggggttggg ggggaggtga ggtaccagcc
1441 ttggatactc catggggtgg gggtggaaaa gcagaccggg gttcccgtgt gcctgagcgg
1501 accttcccag ctagaattca ctccacttgg acatgggccc cagataccat gatgctgagc
1561 ccggaaactc cacatcctgt gggacctggg ccatagtcat tctgcctgcc ctgaaagtcc
1621 cagatcaagc ctgcctcaat cagtattcat atttatagcc aggtaccttc tcacctgtga
1681 gaccaaattg agctaggggg gtcagccagc cctcttctga cactaaaaca cctcagctgc
1741 ctccccagct ctatcccaac ctctcccaac tataaaacta ggtgctgcag cccctgggac
1801 caggcacccc cagaatgacc tggccgcagt gaggcggatt gagaaggagc tcccaggagg
1861 ggcttctggg cagactctgg tcaagaagca tcgtgtctgg cgttgtgggg atgaactttt
1921 tgttttgttt cttccttttt tagttcttca aagataggga gggaaggggg aacatgagcc
1981 tttgttgcta tcaatccaag aacttatttg tacatttttt ttttcaataa aacttttcca
2041 atgaaaaaaa aaaaaaaaaa a
//