LOCUS BC014614 3415 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Scm-like with four mbt domains 1, mRNA (cDNA clone
MGC:3342 IMAGE:3029598), complete cds.
ACCESSION BC014614
VERSION BC014614.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3415)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3415)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC014614.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 10 Row: h Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 53692192.
FEATURES Location/Qualifiers
source 1..3415
/db_xref="H-InvDB:HIT000036812"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3342 IMAGE:3029598"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3415
/gene="SFMBT1"
/gene_synonym="DKFZp434L243"
/gene_synonym="RU1"
/gene_synonym="SFMBT"
/db_xref="GeneID:51460"
/db_xref="HGNC:HGNC:20255"
/db_xref="MIM:607319"
CDS 273..2873
/gene="SFMBT1"
/gene_synonym="DKFZp434L243"
/gene_synonym="RU1"
/gene_synonym="SFMBT"
/codon_start=1
/product="Scm-like with four mbt domains 1"
/protein_id="AAH14614.1"
/db_xref="GeneID:51460"
/db_xref="HGNC:HGNC:20255"
/db_xref="MIM:607319"
/translation="MNGEQQLDADAGSGMEEVELSWEDYLEETGSTAVPYGSFKHVDT
RLQNGFAPGMKLEVAVRTDPETYWVATVITTCEQLLLLRYDGYGEDRRADFWCDIRKA
DLYPIGWCEQNKKTLEAPEGIRDKVSDWDEFLRQTLIGACSPPVPLLEGLRNGRNPLD
LIAPGSRLECQAFQDSLSTWIVTVVENIGGRLKLRYEGLESSDNYEHWLYYLDPFLHH
VGWAAQQGYELQPPSAIRHLKNEAEWQEILAKVKEEEEEPLPSYLFKDKQVIGIHTFS
VNMKLEAVDPWSPFGISPATVVKVFDEKYFLVEMDDLRPENHARRSFVCHADSPGIFP
VQWSLKNGLHISPPPGYPSQDFDWADYLKQCGAEAAPQRCFPPLISEHEFKENMKLEA
VNPILPEEVCVATITAVRGSYLWLQLEGSKKPIPECIVSVESMDIFPLGWCETNGHPL
STPRRARVYKQRKIAVVQPEKQVPSSRTVHEGLRNQELNSTESVMINGKYCCPKIYFN
HRCFSGPYLNKGRIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKDSV
WHGCGEVLKAKYKGKSYRATVEIVKTADRVTEFCRQTCIKLECCPNLFGPRMVLDKCS
ENCSVLTKTKYTHYYGKKKNKRIGRPPGGHSNLACALKKASKRRKRRKNVFVHKKKRS
SASVDNTPAGSPQGSGGEDEDDPDEGDDDSLSEGSTSEQQDELQEESEMSEKKSCSSS
PTQSEISTSLPPDRQRRKRELRTFSFSDDENKPPSPKEIRIEVAERLHLDSNPLKWSV
ADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERI
KFAFYEQFAN"
BASE COUNT 967 a 730 c 876 g 842 t
ORIGIN
1 cgcgagcggg cgagcgcggg cagcacggga ggaaaaagct tccgcgcggg ggagcgaaaa
61 gacggaaaga aagaaagaaa acgagcgcga gagggggaaa agcgagcgat cgagcgagcg
121 cgcgcgcgaa aactccgggc agcactttca tttggacccg tggataccca ttgaacagat
181 gcttgaaacc tgcaagtaat cttcagatcc tagcagaacc ataggccttt cctttgtttt
241 gggaggatat agcctgccta tatgctgtgg aaatgaacgg ggagcagcag cttgatgcag
301 atgccggctc tggtatggaa gaggtagaat taagctggga agattatcta gaagaaacag
361 ggtccacagc agttccctat gggtctttta aacatgtgga cacacgtctg caaaatggat
421 ttgctcctgg gatgaagctg gaggtggctg tgagaacaga tcctgagacc tactgggttg
481 ccaccgttat cactacctgt gagcagttgc tccttctccg ctatgatggc tatggggagg
541 atcggagagc agatttctgg tgtgacatca ggaaggctga tctctacccc attgggtggt
601 gtgagcagaa taagaagacc cttgaagccc cagaaggcat cagagataaa gtatctgact
661 gggatgagtt tctgcggcag accctgatag gagcatgtag tcctcctgtt ccgctgctag
721 agggcctccg taatgggagg aatcctttag atctcattgc tccaggatcc agactagaat
781 gtcaagcttt ccaggactct ttaagcactt ggattgttac tgtagtagaa aacattggag
841 gaaggctgaa gctacgttat gaaggacttg aaagttctga caattatgaa cattggttgt
901 attacttgga tccatttctt catcacgttg gttgggctgc tcaacaggga tatgagcttc
961 agcccccttc agccattaga catctaaaaa atgaagctga gtggcaagag attttggcca
1021 aagtgaaaga ggaagaggaa gagccattac catcttactt atttaaggac aaacaagtta
1081 ttggcattca tacattctct gtaaacatga aattggaagc tgtagacccc tggtctcctt
1141 ttgggatctc tcctgctaca gttgttaagg tttttgatga gaagtacttt ctggtggaaa
1201 tggatgactt gcgtcctgag aaccacgcac ggcgatcctt tgtgtgccac gccgacagtc
1261 ctggcatctt ccctgtgcag tggagtctga agaatggcct acacatcagc ccccctccag
1321 gctacccaag ccaggacttt gactgggctg actacctcaa acagtgtggt gctgaagctg
1381 ctccccagag gtgcttccct ccgttaattt ctgaacatga atttaaggag aacatgaagc
1441 tcgaggcggt gaaccccatt ctccctgaag aagtgtgtgt tgctaccatc actgcagtga
1501 gaggctccta cctgtggctc cagctggagg gttctaagaa gcctatacct gaatgtattg
1561 tgagtgtgga atccatggat atatttcctt tgggctggtg tgaaaccaac ggccaccccc
1621 tcagcactcc tcgccgagca cgagtatata aacagaggaa aattgcagtg gttcagccag
1681 aaaaacaagt accatcctcg aggactgtcc acgagggcct gaggaatcag gagctgaact
1741 ccacagagtc agttatgatt aatggaaaat attgctgtcc aaagatatac ttcaaccacc
1801 gttgcttctc agggccatat cttaacaaag gaagaattgc tgagctgcct caatgtgtag
1861 gacctgggaa ctgtgttctg gtccttagag aggtcctcac tttacttatc aatgcagcct
1921 acaaacccag ccgtgtcctt cgggagctcc agctggacaa agactctgtg tggcacggat
1981 gtggggaagt cctaaaagcc aaatataaag gaaagagtta tcgggctact gttgagatag
2041 tgaaaacagc agatcgggtg actgaattct gccggcaaac ctgtatcaaa ctggaatgct
2101 gtcctaacct cttcggtcca cggatggttc tggataagtg ttctgagaac tgttctgtac
2161 ttacaaagac caaatacaca cactattacg gaaagaagaa aaataaaaga attgggaggc
2221 cacctggtgg gcatagtaac ttagcttgtg ccctgaaaaa agccagtaag aggagaaaga
2281 ggcggaaaaa tgtttttgtt cataagaaga aacgctcctc tgcatctgtt gataataccc
2341 cagcgggctc tccccaggga agtgggggtg aagatgagga tgacccagat gaaggggatg
2401 atgattccct aagtgaaggc agtacatccg agcagcagga tgagctacag gaagaatcag
2461 aaatgtcaga aaaaaagtca tgctcctctt ctcccaccca aagtgagata tccacatcgc
2521 tgcctccaga tagacaaagg agaaaaaggg agcttcgcac cttttcattt tctgacgatg
2581 aaaataaacc tccttcacca aaggaaataa ggatcgaagt tgctgaaagg cttcacctgg
2641 acagtaaccc cttgaagtgg agtgtggcag acgttgtgcg gttcatcaga tccactgact
2701 gtgctccatt agcaagaata ttcctagacc aggaaattga tgggcaggcc ctgttgctcc
2761 ttacccttcc cactgttcaa gaatgcatgg acttaaaatt gggccctgcc atcaaacttt
2821 gccatcacat agagaggatc aagtttgctt tttatgagca gtttgccaac tgagaaggac
2881 aaccaaagtg agctggatct ttgaagcaca aatgcagcaa atccttcacc ctgctttata
2941 agtggagctg gaatagtcct ggggctctgg ggcctgcagg tatcagcttg ctctctttgc
3001 actttcgggg aaggaggact cacagtgagg aagcaaaaac tgtgcacaga agtggatcac
3061 ctgctggtgg aaatgtggac atctcttgtt cagcagatgg cagtttttaa aaaataaagg
3121 ttgtgaggaa aagacttata taagaagaaa agcatttcca gtggtgtggc ctgaaaacaa
3181 agaataacct aggctgctgg aaagcaccct tttggttgtt ttcattctgt tccctcccat
3241 tgtagattga actttgttct ctgctttctt tttcttggaa agagaggact tagctttaag
3301 tcagcactga tttgggactg ttcctaaggc atatcagtgc ttcattgtca ttgtgttttt
3361 aaacttttta aaattaaaac agttcatttt ggggatgaaa aaaaaaaaaa aaaaa
//