LOCUS BC014608 1251 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens spermatogenesis associated 17, mRNA (cDNA clone
MGC:26968 IMAGE:4824429), complete cds.
ACCESSION BC014608
VERSION BC014608.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1251)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1251)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC014608.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: i Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059739.
FEATURES Location/Qualifiers
source 1..1251
/db_xref="H-InvDB:HIT000036807"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26968 IMAGE:4824429"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1251
/gene="SPATA17"
/gene_synonym="IQCH"
/gene_synonym="RP11-144C20.1"
/db_xref="GeneID:128153"
/db_xref="HGNC:HGNC:25184"
CDS 27..1112
/gene="SPATA17"
/gene_synonym="IQCH"
/gene_synonym="RP11-144C20.1"
/codon_start=1
/product="spermatogenesis associated 17"
/protein_id="AAH14608.1"
/db_xref="GeneID:128153"
/db_xref="HGNC:HGNC:25184"
/translation="MATLARLQARSSTVGNQYYFRNSVVDPFRKKENDAAVKIQSWFR
GCQVRAYIRHLNRIVTIIQKWWRSFLGRKQYQLTVQVAYYTMMMNLYNAMAVRIQRRW
RGYRVRKYLFNYYYLKEYLKVVSETNDAIRKALEEFAEMKEREEKKANLEREEKKRDY
QARKMHYLLSTKQIPGIYNSPFRKEPDPWELQLQKAKPLTHRRPKVKQKDSTSLTDWL
ACTSARSFPRSEILPPINRKQCQGPFRDITEVLEQRYRPLEPTLRVAEPIDELKLARE
ELRREEWLQNVNDNMFLPFSSYHKNEKYIPSMHLSSKYGPISYKEQFRSENPKKWICD
KDFQTVLPSFELFSKYGKLYSKAGQIV"
BASE COUNT 454 a 227 c 270 g 300 t
ORIGIN
1 agttgtaaac ccaaggccaa gagaccatgg ccacgttagc ccggctgcaa gctaggtcgt
61 cgactgtagg aaatcagtac tactttagga acagtgttgt agatccattt agaaaaaagg
121 agaatgatgc agcagttaaa atccaaagct ggtttcgagg atgtcaagtt cgggcatata
181 tcaggcattt aaacaggatt gtaacaatta ttcaaaaatg gtggagaagt ttcttaggca
241 gaaagcaata tcaactaact gtgcaggtag catattatac tatgatgatg aatctctaca
301 atgcaatggc tgtcaggatt cagagacgat ggcgaggcta tagggttcgg aagtacctct
361 ttaattatta ttatttgaaa gagtacctga aagtcgtttc agagaccaat gatgcaatta
421 ggaaggcact ggaggagttt gcagaaatga aagaaagaga agagaagaag gctaacctcg
481 aaagggaaga gaagaaaaga gattaccaag cccgaaagat gcattacctc ctcagcacaa
541 agcagattcc aggaatatac aattcaccct tcagaaaaga gcctgatcca tgggagctgc
601 aattacaaaa ggcaaagcct ttaacacacc gaagacctaa agttaagcag aaggactcca
661 ccagccttac tgattggcta gcttgtacaa gcgcccgttc ttttcctcgg tctgaaattc
721 taccacctat taatagaaag caatgtcagg ggcccttccg agatatcacc gaagtattag
781 aacaacgcta caggcctttg gagccaacgt tgcgggtggc agaaccaatc gatgagttaa
841 agttggccag agaggagctc agaagagagg aatggctgca aaatgtaaat gacaatatgt
901 ttttgccatt ttcttcatac cataaaaatg aaaagtacat cccatcaatg catttatcaa
961 gcaagtatgg tcctatttct tacaaagaac aattccgaag tgaaaatcct aagaaatgga
1021 tctgtgacaa ggatttccag actgtattac catcatttga gctcttctca aagtatggaa
1081 aattatattc aaaagctgga cagattgtat aaaggcgtca gaagaagaaa ctgaagccat
1141 ctgcatttta aaacttaaca gttctgaaag gaaaacacag atgaagatcc tgtaggaaat
1201 atacttgcta tgattcaata aactataaaa ttttgaaaaa aaaaaaaaaa a
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