LOCUS BC014601 1205 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens sushi domain containing 3, mRNA (cDNA clone MGC:26847
IMAGE:4821517), complete cds.
ACCESSION BC014601
VERSION BC014601.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1205)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1205)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC014601.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059752.
FEATURES Location/Qualifiers
source 1..1205
/db_xref="H-InvDB:HIT000036802"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26847 IMAGE:4821517"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1205
/gene="SUSD3"
/gene_synonym="MGC26847"
/db_xref="GeneID:203328"
/db_xref="HGNC:HGNC:28391"
CDS 37..804
/gene="SUSD3"
/gene_synonym="MGC26847"
/codon_start=1
/product="sushi domain containing 3"
/protein_id="AAH14601.1"
/db_xref="GeneID:203328"
/db_xref="HGNC:HGNC:28391"
/translation="MRWAAATLRGKARPRGRAGVTTPAPGNRTGTCAKLRLPPQATFQ
VLRGNGASVGTVLMFRCPSNHQMVGSGLLTCTWKGSIAEWSSGSPVCKLVPPHETFGF
KVAVIASIVSCAIILLMSMAFLTCCLLKCVKKSKRRRSNRSAQLWSQLKDEDLETVQA
AYLGLKHFNKPVSGPSQAHDNHSFTTDHGESTSKLASVTRSVDKDPGIPRALSLSGSS
SSPQAQVMVHMANPRQPLPASGLATGMPQQPAAYALG"
BASE COUNT 280 a 379 c 326 g 220 t
ORIGIN
1 ctggtagacc ccgccaagcg cctcggagcg cgcaggatgc gctgggcggc cgccaccctc
61 cgtggcaagg cgaggccccg ggggcgggcc ggggtcacca cgcctgcccc agggaaccgc
121 acaggcacgt gcgctaagct gcggctaccc ccgcaagcaa ccttccaagt ccttcgtggc
181 aatggtgctt ccgtggggac cgtgctcatg ttccgctgcc cctccaacca ccagatggtg
241 gggtctgggc tcctcacctg cacctggaag gggagcatcg ctgagtggtc ttcagggtcc
301 ccagtgtgca aactggtgcc accacacgag acctttggct tcaaggtggc cgtgatcgcc
361 tccattgtga gctgtgccat catcctgctc atgtccatgg ccttcctcac ctgctgcctc
421 ctcaagtgcg tgaagaagag caagcggcgg cgctccaaca ggtcagccca gctgtggtcc
481 cagctgaaag atgaggactt ggagacggtg caggccgcat accttggcct caagcacttc
541 aacaaacccg tgagcgggcc cagccaggcg cacgacaacc acagcttcac cacagaccat
601 ggtgagagca ccagcaagct ggccagtgtg acccgcagcg tggacaagga ccctgggatc
661 cccagagctc taagcctcag tggctcctcc agctcacccc aagcccaggt gatggtgcac
721 atggcaaacc ccagacagcc cctgcctgcc tctgggctgg ccacaggaat gccacaacag
781 cccgcagcat atgccctagg gtgaccacgc agtgaggctg gtgcccatgc tccacactgg
841 gaggccaggc tgaccccacc agccagtcag ctacaactcc acatcaactc cacatgcgcc
901 cagctcgaga ctgatgagtg gaatcagctt ccaggtgtag ggaccccttg aggggccaag
961 ctgacatcca aggctgagga ccccagtggg gagtgttctg ttccggcata tcctggccgt
1021 aacgattttt atagttatgg actacttgaa accactactg agggtaattt actagctgtg
1081 gcctcccact aactagcatt cctttaaaga gactgggaaa tgttttaagc aaatctagtt
1141 ttgtataata aaataagaaa atagcaataa acttcttttc agcaactaca aaaaaaaaaa
1201 aaaaa
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