LOCUS BC014597 1454 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens actin-related protein T1, mRNA (cDNA clone MGC:26590 IMAGE:4825563), complete cds. ACCESSION BC014597 VERSION BC014597.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1454) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1454) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: l Column: 22 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923075. FEATURES Location/Qualifiers source 1..1454 /db_xref="H-InvDB:HIT000036799" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26590 IMAGE:4825563" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1454 /gene="ACTRT1" /gene_synonym="AIP1" /gene_synonym="ARIP1" /gene_synonym="ARP-T1" /gene_synonym="HSD27" /gene_synonym="KIAA0705" /gene_synonym="MGC26590" /gene_synonym="RP1-203C2.1" /db_xref="GeneID:139741" /db_xref="HGNC:HGNC:24027" /db_xref="MIM:300487" CDS 196..1326 /gene="ACTRT1" /gene_synonym="AIP1" /gene_synonym="ARIP1" /gene_synonym="ARP-T1" /gene_synonym="HSD27" /gene_synonym="KIAA0705" /gene_synonym="MGC26590" /gene_synonym="RP1-203C2.1" /codon_start=1 /product="actin-related protein T1" /protein_id="AAH14597.1" /db_xref="GeneID:139741" /db_xref="HGNC:HGNC:24027" /db_xref="MIM:300487" /translation="MFNPHALDVPAVIFDNGSGLCKAGLSGEIGPRHVISSVLGHCKF NVPLARLNQKYFVGQEALYKYEALHLHYPIERGLVTGWDDMEKLWKHLFERELGVKPS QQPVLMTEPSLNPREIREKLAEMMFETFSVPGFYLSNHAVAALYASACVTGLVVDSGD GVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFASGFNFPCILNKAVVNNIKEK LCYIALEPEKELRKSRGEVLGAYRLPDGHVIHFGDELYQVPEVLFAPDQLGIHSPGLS KMVSSSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQLASKGTPIKITASP DRCFSAWIGASIMTSMSSFKQMWVTSADFKEYGTSVVQRRCF" BASE COUNT 388 a 330 c 374 g 362 t ORIGIN 1 agcggagata agattcagag gttgaggatg gggtgtcctg gtggactgaa ggtagcctac 61 tagctgtaca tgggtgacaa cttgaaactt cagaaccctg aagtttaaaa aattctaaag 121 gtgcctgtca tctcagagag tgacgtaagt gttctttctt tatttggggg aagtccagga 181 gaacatatta cagacatgtt taatccacat gcattagatg ttcctgctgt aatttttgac 241 aatggttcag gactctgcaa agcaggcctg tctggagaga ttggaccccg ccatgtcatc 301 agctccgtct tgggacattg taaattcaat gtgcctttag caagacttaa tcagaagtac 361 ttcgtggggc aagaagccct gtacaagtat gaggccctac atttgcacta ccccattgag 421 cgtggactgg taacaggatg ggatgacatg gagaaactct ggaaacatct ctttgagcgg 481 gagcttggag taaaacccag ccaacagcct gtacttatga ccgagccctc tttgaatcct 541 agggaaattc gagaaaagct agcagaaatg atgtttgaga ccttcagtgt gcctggtttc 601 tacctgtcta atcatgcggt ggcagcgctc tatgcctctg cctgtgtcac aggcctggtg 661 gtggacagtg gagatggggt cacttgcact gtccccatct ttgagggtta ctccctgcct 721 cacgcagtca ccaaactctg tatggcaggg agggacatca cagagcacct cacccggctc 781 ctctttgcta gcgggtttaa cttcccttgc atactcaaca aggccgtggt aaataacatc 841 aaagagaagt tgtgctacat cgccttggag ccagagaaag agctacgcaa gagccgggga 901 gaggtcctgg gagcatacag actgccagat ggacatgtca tccactttgg ggatgagctg 961 taccaagtgc ccgaggttct ttttgcacct gaccagctgg gcatccacag cccaggactc 1021 tcaaaaatgg tctccagcag catcatgaag tgtgacactg acatccagaa taaactttat 1081 gcagacattg tactctccgg gggcaccact ctcctccctg ggctggagga aaggctcatg 1141 aaggaagtgg aacagctggc ttccaaaggt actcccatca agatcacagc ttctcctgat 1201 agatgcttct ctgcatggat tggtgcatcc atcatgacct ctatgagcag tttcaagcag 1261 atgtgggtca cctcggcaga cttcaaggag tatgggacat ctgtggttca aagaaggtgc 1321 ttttaaagat ccttgagcag aggagacatc ttgaagtgtc agattacagg agtaccagtg 1381 ggagatggca ttttcttctg ggcttcagca tgatgttcaa taaaagtttt gccattccaa 1441 aaaaaaaaaa aaaa //