LOCUS BC014539 1676 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens secretogranin III, mRNA (cDNA clone MGC:13448
IMAGE:4283082), complete cds.
ACCESSION BC014539
VERSION BC014539.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1676)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1676)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: l Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19557644.
FEATURES Location/Qualifiers
source 1..1676
/db_xref="H-InvDB:HIT000036766"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13448 IMAGE:4283082"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1676
/gene="SCG3"
/gene_synonym="SGIII"
/db_xref="GeneID:29106"
/db_xref="HGNC:HGNC:13707"
CDS 40..1446
/gene="SCG3"
/gene_synonym="SGIII"
/codon_start=1
/product="secretogranin III"
/protein_id="AAH14539.1"
/db_xref="GeneID:29106"
/db_xref="HGNC:HGNC:13707"
/translation="MGFLGTGTWILVLVLPIQAFPKPGGSQDKSLHNRELSAERPLNE
QIAEAEEDKIKKTYPPENKPGQSNYSFVDNLNLLKAITEKEKIEKERQSIRSSPLDNK
LNVEDVDSTKNRKLIDDYDSTKSGLDHKFQDDPDGLHQLDGTPLTAEDIVHKIAARIY
EENDRAAFDKIVSKLLNLGLITESQAHTLEDEVAEVLQKLISKEANNYEEDPNKPTSW
TENQAGKIPEKVTPMAAIQDGLAKGENDETVSNTLTLTNGLERRTKTYSEDNFEELQY
FPNFYALLKSIDSEKEAKEKETLITIMKTLIDFVKMMVKYGTISPEEGVSYLENLDEM
IALQTKNKLEKNATDNISKLFPAPSEKSHEETDSTKEEAAKMEKEYGSLKDSTKDDNS
NPGGKTDEPKGKTEAYLEAIRKNIEWLKKHDKKGNKEDYDLSKMRDFINKQADAYVEK
GILDKEEAEAIKRIYSSL"
BASE COUNT 667 a 293 c 345 g 371 t
ORIGIN
1 ggggagcgcc gggctgtgac ccaagccgag cgtggaagaa tggggttcct cgggaccggc
61 acttggattc tggtgttagt gctcccgatt caagctttcc ccaaacctgg aggaagccaa
121 gacaaatctc tacataatag agaattaagt gcagaaagac ctttgaatga acagattgct
181 gaagcagaag aagacaagat taaaaaaaca tatcctccag aaaacaagcc aggtcagagc
241 aactattctt ttgttgataa cttgaacctg ctaaaggcaa taacagaaaa ggaaaaaatt
301 gagaaagaaa gacaatctat aagaagctcc ccacttgata ataagttgaa tgtggaagat
361 gttgattcaa ccaagaatcg aaaactgatc gatgattatg actctactaa gagtggattg
421 gatcataaat ttcaagatga tccagatggt cttcatcaac tagacgggac tcctttaacc
481 gctgaagaca ttgtccataa aatcgctgcc aggatttatg aagaaaatga cagagccgcg
541 tttgacaaga ttgtttctaa actacttaat ctcggcctta tcacagaaag ccaagcacat
601 acactggaag atgaagtagc agaggtttta caaaaattaa tctcaaagga agccaacaat
661 tatgaggagg atcccaataa gcccacaagc tggactgaga atcaggctgg aaaaatacca
721 gagaaagtga ctccaatggc agcaattcaa gatggtcttg ctaagggaga aaacgatgaa
781 acagtatcta acacattaac cttgacaaat ggcttggaaa ggagaactaa aacctacagt
841 gaagacaact ttgaggaact ccaatatttc ccaaatttct atgcgctact gaaaagtatt
901 gattcagaaa aagaagcaaa agagaaagaa acactgatta ctatcatgaa aacactgatt
961 gactttgtga agatgatggt gaaatatgga acaatatctc cagaagaagg tgtttcctac
1021 cttgaaaact tggatgaaat gattgctctt cagaccaaaa acaagctaga aaaaaatgct
1081 actgacaata taagcaagct tttcccagca ccatcagaga agagtcatga agaaacagac
1141 agtaccaagg aagaagcagc taagatggaa aaggaatatg gaagcttgaa ggattccaca
1201 aaagatgata actccaaccc aggaggaaag acagatgaac ccaaaggaaa aacagaagcc
1261 tatttggaag ccatcagaaa aaatattgaa tggttgaaga aacatgacaa aaagggaaat
1321 aaagaagatt atgacctttc aaagatgaga gacttcatca ataaacaagc tgatgcttat
1381 gtggagaaag gcatccttga caaggaagaa gccgaggcca tcaagcgcat ttatagcagc
1441 ctgtaaaaat ggcaaaagat ccaggagtct ttcaactgtt tcagaaaaca taatatagct
1501 taaaacactt ctaattctgt gattaaaatt ttttgaccca agggttatta gaaagtgctg
1561 aatttacagt agttaacctt ttacaagtgg ttaaaacata gctttcttcc cgtaaaaact
1621 atctgaaagt aaagttgtat gtaagccaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//