LOCUS BC014535 1518 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens parvin, alpha, mRNA (cDNA clone MGC:13400
IMAGE:4065820), complete cds.
ACCESSION BC014535
VERSION BC014535.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1518)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1518)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 19 Row: c Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923815.
FEATURES Location/Qualifiers
source 1..1518
/db_xref="H-InvDB:HIT000036764"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13400 IMAGE:4065820"
/tissue_type="Brain, glioblastoma"
/clone_lib="NIH_MGC_57"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1518
/gene="PARVA"
/gene_synonym="FLJ10793"
/gene_synonym="FLJ12254"
/db_xref="GeneID:55742"
/db_xref="HGNC:HGNC:14652"
/db_xref="MIM:608120"
CDS 29..1147
/gene="PARVA"
/gene_synonym="FLJ10793"
/gene_synonym="FLJ12254"
/codon_start=1
/product="parvin, alpha"
/protein_id="AAH14535.1"
/db_xref="GeneID:55742"
/db_xref="HGNC:HGNC:14652"
/db_xref="MIM:608120"
/translation="MATSPQKSPSAPKSPTPKSPPSRKKDDSFLGKLGGTLARRKKAK
EVSELQEEGMNAINLPLSPIPFELDPEDTMLEENEVRTMVDPNSRSDPKLQELMKVLI
DWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTV
LEKINETLKLPPRSIKWNVDSVHAKSLVAILHLLVALSQYFRAPIRLPDHVSIQVVVV
QKREGILQSRQIQEEITGNTEALSGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHL
NKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELM
QDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE"
BASE COUNT 417 a 398 c 382 g 321 t
ORIGIN
1 gggggcccgc ggcagcctgc gccgcgccat ggccacctcc ccgcagaagt cgccttctgc
61 ccccaagtct cccactccca agtcgccccc gtcccgcaag aaagatgatt ccttcttggg
121 gaaactcgga gggaccctgg cccggaggaa gaaagccaag gaggtgtccg agctgcagga
181 ggagggaatg aacgccatca acctgcccct cagcccaatt ccctttgagc tggaccccga
241 ggacacgatg ctggaggaga atgaggtgcg aacaatggtg gatccaaact cacgcagtga
301 ccccaagctt caagaactga tgaaggtatt aattgactgg attaatgatg tgttggttgg
361 agaaagaatc attgtgaaag acctagctga agatttgtat gatggacaag tcctgcagaa
421 gcttttcgag aaactggaga gtgagaagct aaatgtggct gaggtcaccc agtcagagat
481 tgctcagaag caaaaactgc agactgtcct ggagaagatc aatgaaaccc tgaaacttcc
541 tcccaggagc atcaagtgga atgtggattc tgttcatgcc aagagcctgg tggccatctt
601 acacctgctc gttgctctgt ctcagtattt ccgcgcacca attcgactcc cagaccatgt
661 ttccatccaa gtggttgtgg tccagaaacg agaaggaatc ctccagtctc ggcaaatcca
721 agaggaaata actggtaaca cagaggctct ttccgggagg catgaacgtg atgcctttga
781 caccttgttc gaccatgccc cagacaagct gaatgtggtg aaaaagacac tcatcacttt
841 cgtgaacaag cacctgaata aactgaacct ggaggtcaca gaactggaaa cccagtttgc
901 agatggggtg tacctggtgc tgctcatggg gctcctggag ggctactttg tgcccctgca
961 cagcttcttc ctgaccccgg acagctttga acagaaggtc ttgaatgtct cctttgcctt
1021 tgagctcatg caagatggag ggttggaaaa gccaaaaccg cggccagaag acatagtcaa
1081 ctgtgacctg aaatctacac tacgagtgtt gtacaacctc ttcaccaagt accgtaacgt
1141 ggagtgaggg gctgccctgg gcccaccact gcccaagagt tcttgctgtt ggcgtactgg
1201 accctcctcc gaactgcctt accctgctta ttcctgtctc ttgcactgtg ctctcccaca
1261 agtccagctg caacccagag atagtggaaa ctgaaattag gaaggaaatc atcaataact
1321 cagtgggctg acccatccct cccaggcgct ggggaccaac ctagcaatga aggttgggaa
1381 ggttgttccc ttcccggtgc caggtccaga tttccctcca tgatttggga accagcttag
1441 gcaaaagagt ccccacaaga tgaaaataaa gatcctagtt accattcgaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaa
//