LOCUS BC014489 2725 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens death inducer-obliterator 1, mRNA (cDNA clone
IMAGE:4901057), complete cds.
ACCESSION BC014489
VERSION BC014489.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2725)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2725)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 71044475
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2725
/db_xref="H-InvDB:HIT000036736"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4901057"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2725
/gene="DIDO1"
/gene_synonym="BYE1"
/gene_synonym="DIDO2"
/gene_synonym="DIDO3"
/gene_synonym="DIO-1"
/gene_synonym="DIO1"
/gene_synonym="dJ885L7.8"
/gene_synonym="DKFZp434P1115"
/gene_synonym="FLJ11265"
/gene_synonym="KIAA0333"
/gene_synonym="MGC16140"
/db_xref="GeneID:11083"
/db_xref="HGNC:HGNC:2680"
/db_xref="MIM:604140"
CDS 238..1926
/gene="DIDO1"
/gene_synonym="BYE1"
/gene_synonym="DIDO2"
/gene_synonym="DIDO3"
/gene_synonym="DIO-1"
/gene_synonym="DIO1"
/gene_synonym="dJ885L7.8"
/gene_synonym="DKFZp434P1115"
/gene_synonym="FLJ11265"
/gene_synonym="KIAA0333"
/gene_synonym="MGC16140"
/codon_start=1
/product="death inducer-obliterator 1"
/protein_id="AAH14489.1"
/db_xref="GeneID:11083"
/db_xref="HGNC:HGNC:2680"
/db_xref="MIM:604140"
/translation="MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAE
ADPLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSC
PATDAETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLT
LKELQNRLRRKREQEPTERPLKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQE
PENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQP
HNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETHSETAD
QQEAKWRPGDADGTDCTSIGTIEQKSSEDQGIKGRIEKAANPSGKKKLKIFQPVIEAP
GASKCIGPGCCHVAQPDSVYCSNDCILKHAAATMKFLSSGKEQKPKPKEKMKMKPEKP
SLPKCGAQAGIKISSVHKRPAPEKKETTVKKAVVVPARSEALGKEAACESSTPSWASD
HNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLDPSRSFWIAIPWACPGLGVAALC"
BASE COUNT 700 a 678 c 740 g 607 t
ORIGIN
1 ggaaatggct gcgagaccct agaggcctgc ggcctgcgga gcttactcca cgggaacagc
61 ctctagataa tctgagttgt tgaaaatacg aagcctgtta ctcgtgaaca gtggctgaca
121 acagtgttgt tgtgagcctg gctgtctgct tggacccaga ggtttcgtct gccagggttt
181 ttggttgtat ttaggatttc agggaaaagt gtccaagctt tcagtgttgg agcaggtatg
241 gacgacaaag gcgacccgag caatgaggag gcacctaagg ccatcaaacc caccagcaaa
301 gagttcagga aaacatgggg ttttcgaagg accactatcg ccaagcgaga gggcgcaggg
361 gacgcggagg ctgacccact ggagccgcca cccccacagc agcagctggg cctgtccctg
421 cggcgcagtg ggaggcagcc caagcgcact gagcgcgtgg agcagttcct gaccattgcg
481 cggcgccgcg gcaggaggag catgcctgtc tccctggagg attctggtga gcccacgtcc
541 tgccccgcca cagacgccga gacagcctcc gagggcagcg tggaaagcgc ttctgagacc
601 agaagcggcc cccagtctgc ttccacagct gtgaaggaac gaccagcctc ttctgaaaag
661 gtgaaaggag gggatgacca cgatgacacc tccgatagtg acagcgatgg cctgaccttg
721 aaagagcttc agaatcgcct tcgcaggaag cgggaacagg agcccactga gaggcccctg
781 aaagggatcc agagtcgcct gcggaagaag cgccgggagg agggtcccgc cgagactgtg
841 ggctccgagg ccagtgacac tgtggagggc gtcctgccca gtaagcagga gcccgagaac
901 gatcaggggg ttgtgtccca ggctgggaaa gatgacagag agagtaagtt ggagggaaag
961 gcggctcagg acatcaaaga tgaggagcct ggagacttgg gccgaccgaa gcctgaatgt
1021 gagggttacg accccaacgc cctgtattgc atttgccgcc agcctcacaa caacaggttt
1081 atgatttgct gtgaccgctg tgaagaatgg tttcatggcg attgtgtggg catttctgag
1141 gctcgaggga ggcttttgga aaggaatggg gaagactata tctgcccaaa ctgcaccatt
1201 ctgcaagtgc aggatgagac tcattcagaa acggcagatc agcaggaagc taaatggaga
1261 cctggagatg ctgatggcac cgattgtaca agtataggaa caatagagca gaagtctagc
1321 gaagaccaag ggataaaggg tagaattgag aaagctgcaa atccaagtgg caagaagaaa
1381 ctcaagatct tccagcctgt gatagaggcg cctggtgcct caaaatgtat tggccccggg
1441 tgctgtcacg tggcgcagcc cgactcggtg tactgcagta atgactgtat cctcaaacac
1501 gccgcagcga caatgaagtt tctaagctca ggtaaagaac agaagccaaa gcctaaagaa
1561 aagatgaaga tgaagccaga gaagcccagt cttccgaaat gcggtgctca ggcaggtatt
1621 aaaatctctt ctgtgcacaa gagaccagct ccagaaaaaa aagagaccac agtgaagaag
1681 gcagtggtgg tccctgcgcg gagtgaagca ctcgggaagg aagcagcttg tgagagcagc
1741 acgccgtcgt gggcgagcga tcacaattac aatgcagtaa agccagaaaa gactgctgct
1801 ccctcgccgt cactgttgta taaatgtatg tatcacctag gggttggcct cctggacccc
1861 tcccgttctt tctggatagc catcccctgg gcctgtccag gactgggagt tgcagctttg
1921 tgttaagctg atcacagaca ccggctgcac catcagcggg aagcagagcc catgtccagg
1981 atgcctcctg ctgccctgtg tccatcccta gtctgtcagg acttcctgtc actgttttcc
2041 aaagctgtaa acctcactgg tgaacgttca ccttaatgat tgattcttta atctctgttt
2101 tcactctcag gctctggtaa gtattcgtat tctcttcatc ccagtctgat tgcatagcca
2161 cactgcccgg cacgccacat ccacccctgt ctgcacatga gttgttctga caacagcgct
2221 gtatacgctt cagtttttcc acattgtcca cggccagcac atgaaagcat cacttctttt
2281 ttatgttgtg ggaatctttg caagttagtg ttgcatctga ttttcaggtg tacatttatt
2341 tttgactggg cagatagggg attttttttt ttccatgtcc gattcacacg ctacacaccc
2401 acatgaacac attcgaactt cgaaggccac acactcctgc ttcataggcc ccacggtaag
2461 tgagttcaca cctagaacac tgtcctgacc gcaggacgcg tgccttggac ttggtattct
2521 acatgtgact ggctttcttg ccctcgtctc ttgaatgttt agactcttaa gatcatatcc
2581 tgccccaaat ttcaaattaa tgaaatgaag atatttcaaa cagatctttg aaacctcaga
2641 ttctgtggtg caattttaat gttttcttgt ttctcagttt tctgctataa aactattttc
2701 aattcagaaa aaaaaaaaaa aaaaa
//