LOCUS BC014478 3395 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit,
non-ATPase, 5, mRNA (cDNA clone MGC:23145 IMAGE:4878087), complete
cds.
ACCESSION BC014478
VERSION BC014478.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3395)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3395)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: n Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25777613.
FEATURES Location/Qualifiers
source 1..3395
/db_xref="H-InvDB:HIT000036727"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23145 IMAGE:4878087"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3395
/gene="PSMD5"
/gene_synonym="KIAA0072"
/gene_synonym="MGC23145"
/gene_synonym="S5B"
/db_xref="GeneID:5711"
/db_xref="HGNC:HGNC:9563"
/db_xref="MIM:604452"
CDS 2..1516
/gene="PSMD5"
/gene_synonym="KIAA0072"
/gene_synonym="MGC23145"
/gene_synonym="S5B"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
non-ATPase, 5"
/protein_id="AAH14478.1"
/db_xref="GeneID:5711"
/db_xref="HGNC:HGNC:9563"
/db_xref="MIM:604452"
/translation="MAAQALALLREVARLEAPLEELRALHSVLQAVPLNELRQQAAEL
RLGPLFSLLNENHREKTTLCVSILERLLQAMEPVHVARNLRVDLQRGLIHPDDSVKIL
TLSQIGRIVENSDAVTEILNNAELLKQIVYCIGGENLSVAKAAIKSLSRISLTQAGLE
ALFESNLLDDLKSVMKTNDIVRYRVYELIIEISSVSPESLNYCTTSGLVTQLLRELTG
EDVLVRATCIEMVTSLAYTHHGRQYLAQEGVIDQISNIIVGADSDPFSSFYLPGFVKF
FGNLAVMDSPQQICERYPIFVEKVFEMIESQDPTMIGVAVDTVGILGSNVEGKQVLQK
TGTRFERLLMRIGHQSKNAPVELKIRCLDAISSLLYLPPEQQTDDLLRMTESWFSSLS
RDPLELFRGISSQPFPELHCAALKVFTAIANQPWAQKLMFNSPGFVEYVVDRSVEHDK
ASKDAKYELVKALANSKTIAEIFGNPNYLRLRTYLSEGPYYVKPVSTTAVEGAE"
BASE COUNT 981 a 697 c 670 g 1047 t
ORIGIN
1 gatggcagcc caggctttgg cgctgctgag agaggtagcg aggctggaag cgccgctgga
61 ggagctacgc gcgcttcact ccgtgctgca ggcagtgccg ctcaacgagc ttcgccagca
121 agcggcggag ctgcgcctcg gcccgctctt ctccctgctt aacgagaacc atagggaaaa
181 gactactttg tgtgtatcca ttctggagag attgctccaa gctatggaac cggttcacgt
241 ggcccggaac ctcagggttg acctgcagag gggactaatt caccctgatg attctgtaaa
301 aatcctcact ctttcccaga ttggaagaat tgttgaaaat tctgatgctg ttactgagat
361 tctaaataat gctgaattac taaaacaaat tgtttattgc attggtggag agaatctatc
421 tgtagcaaaa gcggctatca aatccctgtc aagaatatca ctaacccaag ctggactgga
481 ggctttattt gaaagcaatc tgctggatga tttgaaaagt gtaatgaaaa caaatgacat
541 tgttcgatac agggtgtatg agctaattat agagatttct tccgtgtcac cagaatcttt
601 aaactactgt accacaagtg gattggtaac ccagctcctg agagagctga ctggtgagga
661 tgtgttggtc agagccacct gtatagaaat ggtgacatca ctggcatata ctcatcatgg
721 gcgacaatat cttgctcaag aaggagtaat tgaccaaatt tctaatataa ttgttggggc
781 agattcagac cctttctcta gcttctatct gccaggattc gtgaagtttt ttggaaacct
841 ggctgtcatg gatagtcctc aacagatctg tgagcgttat cctatctttg tggaaaaagt
901 ctttgaaatg atagaaagtc aggaccccac tatgattggt gtagctgtag acacagttgg
961 aatcttggga tccaatgttg aaggaaaaca ggttttacag aaaacaggaa ctcgctttga
1021 acgcttgctt atgagaatag gacatcaatc aaagaatgcc ccagtggagc taaaaattag
1081 atgtttggat gcaatttcat ctcttctgta cttaccacct gagcagcaga ctgatgacct
1141 tctgaggatg acagaatcct ggttttcttc tttatctcgg gatccactgg agctcttccg
1201 tggcattagt agtcagccct tccctgaact acactgtgct gccttaaaag tgtttacggc
1261 cattgcaaac caaccctggg ctcagaaact tatgtttaac agtccaggtt ttgtagaata
1321 tgtggtggac cggtctgtgg agcatgacaa agcttcaaag gatgccaaat atgaactagt
1381 gaaagcactt gccaattcca agacaattgc agaaatcttt gggaacccaa attatttgag
1441 gctcagaact tacctgagtg aagggccata ctatgtgaaa cctgtttcca cgacagcagt
1501 agaaggagcc gaatgatttc ttctagagct catctataga ggaccacgtt ttgaccaaaa
1561 cttctcctaa ggcatttgac tccatctata tttcacaaaa gagacttcct ttccccaaga
1621 attatcatgg aatgtcagat gttactttgt taccaacact gttatatttc tacattgaaa
1681 tgcaaagtgg aactaggagt ttggaatgca ttaagagcag acaagcttgg tcataataga
1741 tccagtgttt ttcagattcc tttcactgcc ttaatctttg caacagggtg gaagtttttt
1801 tcttccctca aaattttcat ggacatgcaa tcttatctaa aagcctgctt cagggctggg
1861 cgcggtggct aacacctata attcccagca ctttgggagg ccaagatggg caaatcactt
1921 gagtctagga gttcaagacc agcctggcca atatggcaaa accctgtctc tactaaaaat
1981 ataaaatcag ccaggcatgg tggcgcacac ctataatctc agctactcag gaggctgagg
2041 cacgagaatc gcttgagcct gggaggcaga ggttgcagtg agctgagatc ttgccactgc
2101 acaccagcct gggcaacaca gcaagactct gtctcaaaaa taaatgaata aaataaaaac
2161 ctgccaccaa attatttctg gattctcttc actatctttt tttttctttt tggtcctttt
2221 tccatttctg attccacttt caaagtcttg gatatattct ttgaaaaatg agtagtatgg
2281 aatattaaga ttatgttcct tatactcaga atacttttta tgagctctct tgtttttttg
2341 ttactattat tcctttgaaa aaaagacaaa atatctaaaa aatgtttata gtgttcatgt
2401 aatttttttt gctgtttacc aatgaacttt gccctgttgt ggttttgggg gatcagaagg
2461 attcctaaac tgtcatttca tttattggta ggtcatgatt gctgagggtt ttgctttgga
2521 tttttcatac ctataaagtc aatcttgagt tgatcagaga aagggaaact tactcctaat
2581 aaacagactc agaacagaag ggacatatgc ataaatcagg ataccatctc attaatttac
2641 aaaggataat ctttcttttc attgacaaca cctacaccca cctgttttcc agtgttcttc
2701 tctctaaaca gcaaagccaa agcactctgc acaccaaatc acctgttcag aggtttatgc
2761 atgagcatat ttcttttagg ccgtggtgaa gttgataaac cacccctgct ttgtaacaaa
2821 attattttaa agtgactgga attatctagt ccccagattg atcatctccc ctggcaacgt
2881 gactctgttt tttgtgtgtg tttccatgct gactagtccc ctactgttaa tatcactact
2941 aattaggcta taaccaggtc tttcctggcc tgagaaatat tctcttaaaa tgacctttgt
3001 tttaatctca ttcatgatgt tgattttttt tcaatgtggt gcaatatata caataaaatt
3061 tgtcataact attttaagtg tacagttcag tatattacat atgttcataa gttgtacaac
3121 catcaccacc atccatcttc agaattattt tcatcttata caattgaaac tgtattcatt
3181 aaacaataac tgtctattcc ctcttttccc cagcctctgg caaccaccat tctgcttcat
3241 gacattgatt ttattcactt aacatcagat tttgggggga tgccctctct cctatgtatg
3301 gtctacacat tctgattttt tttttagatt gaataaaatt tgtaaatcat tattttcatt
3361 tcataagtaa aaaaaaaaaa aaaaaaaaaa aaaaa
//