LOCUS BC014424 1506 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens claudin 2, mRNA (cDNA clone MGC:20191 IMAGE:4645075),
complete cds.
ACCESSION BC014424
VERSION BC014424.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1506)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1506)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: m Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38455423.
FEATURES Location/Qualifiers
source 1..1506
/db_xref="H-InvDB:HIT000036690"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20191 IMAGE:4645075"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1506
/gene="CLDN2"
/db_xref="GeneID:9075"
/db_xref="HGNC:HGNC:2041"
/db_xref="MIM:300520"
CDS 122..814
/gene="CLDN2"
/codon_start=1
/product="claudin 2"
/protein_id="AAH14424.1"
/db_xref="GeneID:9075"
/db_xref="HGNC:HGNC:2041"
/db_xref="MIM:300520"
/translation="MASLGLQLVGYILGLLGLLGTLVAMLLPSWKTSSYVGASIVTAV
GFSKGLWMECATHSTGITQCDIYSTLLGLPADIQAAQAMMVTSSAISSLACIISVVGM
RCTVFCQESRAKDRVAVAGGVFFILGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEI
GEALYLGIISSLFSLIAGIILCFSCSSQRNRSNYYDAYQAQPLATRSSPRPGQPPKVK
SEFNSYSLTGYV"
BASE COUNT 377 a 404 c 376 g 349 t
ORIGIN
1 gagagaagtc agcctggcag agagactctg aaatgaggga ttagaggtgt tcaaggagca
61 agagcttcag cctgaagaca agggagcagt ccctgaagac gcttctactg agaggtctgc
121 catggcctct cttggcctcc aacttgtggg ctacatccta ggccttctgg ggcttttggg
181 cacactggtt gccatgctgc tccccagctg gaaaacaagt tcttatgtcg gtgccagcat
241 tgtgacagca gttggcttct ccaagggcct ctggatggaa tgtgccacac acagcacagg
301 catcacccag tgtgacatct atagcaccct tctgggcctg cccgctgaca tccaggctgc
361 ccaggccatg atggtgacat ccagtgcaat ctcctccctg gcctgcatta tctctgtggt
421 gggcatgaga tgcacagtct tctgccagga atcccgagcc aaagacagag tggcggtagc
481 aggtggagtc tttttcatcc ttggaggcct cctgggattc attcctgttg cctggaatct
541 tcatgggatc ctacgggact tctactcacc actggtgcct gacagcatga aatttgagat
601 tggagaggct ctttacttgg gcattatttc ttccctgttc tccctgatag ctggaatcat
661 cctctgcttt tcctgctcat cccagagaaa tcgctccaac tactacgatg cctaccaagc
721 ccaacctctt gccacaagga gctctccaag gcctggtcaa cctcccaaag tcaagagtga
781 gttcaattcc tacagcctga cagggtatgt gtgaagaacc aggggccaga gctggggggt
841 ggctgggtct gtgaaaaaca gtggacagca ccccgagggc cacaggtgag ggacactacc
901 actggatcgt gtcagaaggt gctgctgagg atagactgac tttggccatt ggattgagca
961 aaggcagaaa tgggggctag tgtaacagca tgcaggttga attgccaagg atgctcgcca
1021 tgccagcctt tctgttttcc tcaccttgct gctcccctgc cctaagtccc caaccctcaa
1081 cttgaaaccc cattccctta agccaggact cagaggatcc ctttgccctc tggtttacct
1141 gggactccat ccccaaaccc actaatcaca tcccactgac tgaccctctg tgatcaaaga
1201 ccctctctct ggctgaggtt ggctcttagc tcattgctgg ggatgggaag gagaagcagt
1261 ggcttttgtg ggcattgctc taacctactt ctcaagcttc cctccaaaga aactgattgg
1321 ccctggaacc tccatcccac tcttgttatg actccacagt gtccagacta atttgtgcat
1381 gaactgaaat aaaaccatcc tacggtatcc agggaacaga aagcaggatg caggatggga
1441 ggacaggaag gcagcctggg acatttaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaa
//