LOCUS BC014418 1409 bp mRNA linear HUM 08-DEC-2006
DEFINITION Homo sapiens superoxide dismutase 3, extracellular, mRNA (cDNA
clone MGC:20077 IMAGE:4644224), complete cds.
ACCESSION BC014418
VERSION BC014418.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1409)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1409)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 29 Row: m Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4507150.
FEATURES Location/Qualifiers
source 1..1409
/db_xref="H-InvDB:HIT000036686"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20077 IMAGE:4644224"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1409
/gene="SOD3"
/gene_synonym="EC-SOD"
/gene_synonym="MGC20077"
/db_xref="GeneID:6649"
/db_xref="HGNC:HGNC:11181"
/db_xref="MIM:185490"
CDS 71..793
/gene="SOD3"
/gene_synonym="EC-SOD"
/gene_synonym="MGC20077"
/codon_start=1
/product="superoxide dismutase 3, extracellular"
/protein_id="AAH14418.1"
/db_xref="GeneID:6649"
/db_xref="HGNC:HGNC:11181"
/db_xref="MIM:185490"
/translation="MLALLCSCLLLAAGASDAWTGEDSAEPNSDSAEWIRDMYAKVTE
IWQEVMQRRDDDGTLHAACQVQPSATLDAAQPRVTGVVLFRQLAPRAKLDAFFALEGF
PTEPNSSSRAIHVHQFGDLSQGCESTGPHYNPLAVPHPQHPGDFGNFAVRDGSLWRYR
AGLAASLAGPHSIVGRAVVVHAGEDDLGRGGNQASVENGNAGRRLACCVVGVCGPGLW
ERQAREHSERKKRRRESECKAA"
BASE COUNT 236 a 539 c 411 g 223 t
ORIGIN
1 gctgggtgca gctctctttt caggagagaa agctctcttg gaggagctgg aaaggtgccc
61 gactccagcc atgctggcgc tactgtgttc ctgcctgctc ctggcagccg gtgcctcgga
121 cgcctggacg ggcgaggact cggcggagcc caactctgac tcggcggagt ggatccgaga
181 catgtacgcc aaggtcacgg agatctggca ggaggtcatg cagcggcggg acgacgacgg
241 cacgctccac gccgcctgcc aggtgcagcc gtcggccacg ctggacgccg cgcagccccg
301 ggtgaccggc gtcgtcctct tccggcagct tgcgccccgc gccaagctcg acgccttctt
361 cgccctggag ggcttcccga ccgagccgaa cagctccagc cgcgccatcc acgtgcacca
421 gttcggggac ctgagccagg gctgcgagtc caccgggccc cactacaacc cgctggccgt
481 gccgcacccg cagcacccgg gcgacttcgg caacttcgcg gtccgcgacg gcagcctctg
541 gaggtaccgc gccggcctgg ccgcctcgct cgcgggcccg cactccatcg tgggccgggc
601 cgtggtcgtc cacgctggcg aggacgacct gggccgcggc ggcaaccagg ccagcgtgga
661 gaacgggaac gcgggccggc ggctggcctg ctgcgtggtg ggcgtgtgcg ggcccgggct
721 ctgggagcgc caggcgcggg agcactcaga gcgcaagaag cggcggcgcg agagcgagtg
781 caaggccgcc tgagcgcggc ccccacccgg cggcggccag ggacccccga ggcccccctc
841 tgcctttgag cttctcctct gctccaacag acaccttcca ctctgaggtc tcaccttcgc
901 ctctgctgaa gtctccccgc agccctctcc acccagaggt ctccctatac cgagacccac
961 catccttcca tcctgaggac cgccccaacc ctcggagccc cccactcagt aggtctgaag
1021 gcctccattt gtaccgaaac accccgctca cgctgacagc ctcctaggct ccctgaggta
1081 cctttccacc cagaccctcc ttccccaccc cataagccct gagactcccg cctttgacct
1141 gacgatcttc ccccttcccg ccttcaggtt cctcctaggc gctcagaggc cgctctgggg
1201 ggttgcctcg agtcccccca cccctcccca cccaccaccg ctcccgcggc aagccagccc
1261 gtgcaacgga agccaggcca actgccccgc gtcttcagct gtttcgcatc caccgccacc
1321 ccactgagag ctgctccttt gggggaatgt ttggcaacct ttgtgttaca gattaaaaat
1381 tcagcaattc aaaaaaaaaa aaaaaaaaa
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