LOCUS BC014391 1544 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 43, mRNA (cDNA clone
MGC:1148 IMAGE:3544590), complete cds.
ACCESSION BC014391
VERSION BC014391.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1544)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1544)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: p Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149687.
FEATURES Location/Qualifiers
source 1..1544
/db_xref="H-InvDB:HIT000036669"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1148 IMAGE:3544590"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1544
/gene="C1orf43"
/gene_synonym="DKFZp586G1722"
/gene_synonym="HSPC012"
/gene_synonym="NICE-3"
/gene_synonym="S863-3"
/db_xref="GeneID:25912"
/db_xref="HGNC:HGNC:29876"
CDS 127..786
/gene="C1orf43"
/gene_synonym="DKFZp586G1722"
/gene_synonym="HSPC012"
/gene_synonym="NICE-3"
/gene_synonym="S863-3"
/codon_start=1
/product="chromosome 1 open reading frame 43"
/protein_id="AAH14391.1"
/db_xref="GeneID:25912"
/db_xref="HGNC:HGNC:29876"
/translation="MASGSNWLSGVNVVLVMAYGSLDLKEEIDIRLSRVQDIKYEPQL
LADDDARLLQLETQGNQSCYNYLYRMKALDAIRTSEIPFHSEGRHPRSLMGKNFRSYL
LDLRNTSTPFKGVRKALIDTLLDGYETARYGTGVFGQNEYLRYQEALSELATAVKARI
GSSQRHHQSAAKDLTQSPEVSPTTIQVTYLPSSQKSKRAKHFLELKSFKDNYNTLEST
L"
BASE COUNT 417 a 358 c 372 g 397 t
ORIGIN
1 cttcccccgt aaggaaatgg ccggggagct ccaggggacc caggcgccgt cgcttcggcg
61 gagcctgggc tgaccagcca ggacagcggg gtaaacccga acaattctgc gcgaggtagg
121 gaggccatgg cgtccggcag taactggctc tccggggtga atgtcgtgct ggtgatggcc
181 tacgggagcc tggacttgaa agaggagatt gatattcgac tctccagggt tcaggatatc
241 aagtatgagc cccagctcct tgcagatgat gatgctagac tactacaact ggaaacccag
301 ggaaatcaaa gttgctacaa ctatctgtat aggatgaaag ctctggatgc cattcgtacc
361 tctgagatcc catttcattc tgaaggccgg catccccgtt ccttaatggg caagaatttc
421 cgctcctacc tgctggatct gcgaaacact agtacgcctt tcaagggtgt acgcaaagca
481 ctcattgata cccttttgga tggctatgaa acagcccgct atgggacagg ggtctttggc
541 cagaatgagt acctacgcta tcaggaggcc ctgagtgagc tggccactgc ggttaaagca
601 cgaattggga gctctcagcg acatcaccag tcagcagcca aagacctaac tcagtcccct
661 gaggtctccc caacaaccat ccaggtgaca tacctcccct ccagtcagaa gagtaaacgt
721 gccaagcact tccttgaatt gaagagcttt aaggataact ataacacatt ggagagtact
781 ctgtgacgga gctgaaggac tcttgccgta gattaagcca gtcagttgca atgtgcaaga
841 caggctgctt gccgggccgc cctcggaaca tctggcccag caggcccaga ctgtatccat
901 ccaagttccc gttgtatcca gagttcttag agcttgtgtc taaagggtaa ttccccaacc
961 cttccttatg agcattttta gaacattggc taagactatt ttcccccagt agcgcttttt
1021 tctggatttg cattcaggtg ttattcttaa tgtttctgtc aaagcttctt aaaaatcttc
1081 acttggtttc agccatagtt caccttccct gttccaggtt tatttaattc caaaggtgag
1141 agttggagtg agatgtcttc catatctata cctttgtgca cagttgaatg ggaactgttt
1201 gggtttaggg catcttagag ttgattgatg gaaaaagcag acaggaactg gtgggaggtc
1261 aagtggggaa gttggtgaat gtggaataac ttacctttgt gctccactta aaccagatgt
1321 gttgcagctt tcctgacatg caaggatcta ctttaattcc acactctcat taataaattg
1381 aataaaaggg aatgttttgg cacctgatat aatctgccag gctatgtgac agtaggaagg
1441 aatggtttcc cctaacaagc ccaatgcact ggtctgactt tataaattat ttaataaaat
1501 gaactattat caaataaaac gtaaaaaaaa aaaaaaaaaa aaaa
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