LOCUS BC014305 3143 bp mRNA linear HUM 21-JUL-2008
DEFINITION Homo sapiens high density lipoprotein binding protein, mRNA (cDNA
clone IMAGE:4099438), partial cds.
ACCESSION BC014305
VERSION BC014305.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3143)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3143)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC014305.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: p Column: 5.
FEATURES Location/Qualifiers
source 1..3143
/db_xref="H-InvDB:HIT000088347"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4099438"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3143
/gene="HDLBP"
/gene_synonym="HBP"
/gene_synonym="PRO2900"
/db_xref="GeneID:3069"
/db_xref="HGNC:HGNC:4857"
/db_xref="MIM:142695"
CDS <1..2697
/gene="HDLBP"
/gene_synonym="HBP"
/gene_synonym="PRO2900"
/codon_start=1
/product="HDLBP protein"
/protein_id="AAH14305.2"
/db_xref="GeneID:3069"
/db_xref="HGNC:HGNC:4857"
/db_xref="MIM:142695"
/translation="APSWLHRFIIGKKGQNLAKITQQMPKVHIEFTEGEDKITLEGPT
EDVNVAQEQIEGMVKDLINRMDYVEINIDHKFHRHLIGKSGANINRIKDQYKVSVRIP
PDSEKSNLIRIEGDPQGVQQAKRELLELASRMENERTKDLIIEQRFHRTIIGQKGERI
REIRDKFPEVIINFPDPAQKSDIVQLRGPKNEVEKCTKYMQKMVADLVENSYSISVPI
FKQFHKNIIGKGGANIKKIREESNTKIDLPAENSNSETIIITGKRANCEAARSRILSI
QKDLANIAEVEVSIPAKLHNSLIGTKGRLIRSIMEECGGVHIHFPVEGSGSDTVVIRG
PSSDVEKAKKQLLHLAEEKQTKSFTVDIRAKPEYHKFLIGKGGGKIRKVRDSTGARVI
FPAAEDKDQDLITIIGKEDAVREAQKELEALIQNLDNVVEDSMLVDPKHHRHFVIRRG
QVLREIAEEYGGVMVSFPRSGTQSDKVTLKGAKDCVEAAKKRIQEIIEDLEAQVTLEC
AIPQKFHRSVMGPKGSRIQQITRDFSVQIKFPDREENAVHSTEPVVQENGDEAGEGRE
AKDCDPGSPRRCDIIIISGRKEKCEAAKEALEALVPVTIEVEVPFDLHRYVIGQKGSG
IRKMMDEFEVNIHVPAPELQSDIIAITGLAANLDRAKAGLLERVKELQAEQEDRALRS
FKLSVTVDPKYHPKIIGRKGAVITQIRLEHDVNIQFPDKDDGNQPQDQITITGYEKNT
EAARDAILRIVGELEQMVSEDVPLDHRVHARIIGARGKAIRKIMDEFKVDIRFPQSGA
PDPNCVTVTGLPENVEEAIDHILNLEEEYLADVVDSEALQVYMKPPAHEEAKAPSRGF
VVRDAPWTASSSEKAPDMSSSEEFPSFGAQVAPKTLPWGPKR"
BASE COUNT 909 a 807 c 841 g 586 t
ORIGIN
1 gccccttcct ggcttcaccg tttcatcatt ggcaagaaag ggcagaacct ggccaaaatc
61 actcagcaga tgccaaaggt tcacatcgag ttcacagagg gcgaagacaa gatcaccctg
121 gagggcccta cagaggatgt caatgtggcc caggaacaga tagaaggcat ggtcaaagat
181 ttgattaacc ggatggacta tgtggagatc aacatcgacc acaagttcca caggcacctc
241 attgggaaga gcggtgccaa cataaacaga atcaaagacc agtacaaggt gtccgtgcgc
301 atccctcctg acagtgagaa gagcaatttg atccgcatcg agggggaccc acagggcgtg
361 cagcaggcca agcgagagct gctggagctt gcatctcgca tggaaaatga gcgtaccaag
421 gatctaatca ttgagcaaag atttcatcgc acaatcattg ggcagaaggg tgaacggatc
481 cgtgaaattc gtgacaaatt cccagaggtc atcattaact ttccagaccc agcacaaaaa
541 agtgacattg tccagctcag aggacctaag aatgaggtgg aaaaatgcac aaaatacatg
601 cagaagatgg tggcagatct ggtggaaaat agctattcaa tttctgttcc gatcttcaaa
661 cagtttcaca agaatatcat tgggaaagga ggcgcaaaca ttaaaaagat tcgtgaagaa
721 agcaacacca aaatcgacct tccagcagag aatagcaatt cagagaccat tatcatcaca
781 ggcaagcgag ccaactgcga agctgcccgg agcaggattc tgtctattca gaaagacctg
841 gccaacatag ccgaggtaga ggtctccatc cctgccaagc tgcacaactc cctcattggc
901 accaagggcc gtctgatccg ctccatcatg gaggagtgcg gcggggtcca cattcacttt
961 cccgtggaag gttcaggaag cgacaccgtt gttatcaggg gcccttcctc ggatgtggag
1021 aaggccaaga agcagctcct gcatctggcg gaggagaagc aaaccaagag tttcactgtt
1081 gacatccgcg ccaagccaga ataccacaaa ttcctcatcg gcaagggggg cggcaaaatt
1141 cgcaaggtgc gcgacagcac tggagcacgt gtcatcttcc ctgcggctga ggacaaggac
1201 caggacctga tcaccatcat tggaaaggag gacgccgtcc gagaggcaca gaaggagctg
1261 gaggccttga tccaaaacct ggataatgtg gtggaagact ccatgctggt ggaccccaag
1321 caccaccgcc acttcgtcat ccgcagaggc caggtcttgc gggagattgc tgaagagtat
1381 ggcggggtga tggtcagctt cccacgctct ggcacacaga gcgacaaagt caccctcaag
1441 ggcgccaagg actgtgtgga ggcagccaag aaacgcattc aggagatcat tgaggacctg
1501 gaagctcagg tgacattaga atgtgctata ccccagaaat tccatcgatc tgtcatgggc
1561 cccaaaggtt ccagaatcca gcagattact cgggatttca gtgttcaaat taaattccca
1621 gacagagagg agaacgcagt tcacagtaca gagccagttg tccaggagaa tggggacgaa
1681 gctggggagg ggagagaggc taaagattgt gaccccggct ctccaaggag gtgtgacatc
1741 atcatcatct ctggccggaa agaaaagtgt gaggctgcca aggaagctct ggaggcattg
1801 gttcctgtca ccattgaagt agaggtgccc tttgaccttc accgttacgt tattgggcag
1861 aaaggaagtg ggatccgcaa gatgatggat gagtttgagg tgaacataca tgtcccggca
1921 cctgagctgc agtctgacat catcgccatc acgggcctcg ctgcaaattt ggaccgggcc
1981 aaggctggac tgctggagcg tgtgaaggag ctacaggccg agcaggagga ccgggcttta
2041 aggagtttta agctgagtgt cactgtagac cccaaatacc atcccaagat tatcgggaga
2101 aagggggcag taattaccca aatccggttg gagcatgacg tgaacatcca gtttcctgat
2161 aaggacgatg ggaaccagcc ccaggaccaa attaccatca cagggtacga aaagaacaca
2221 gaagctgcca gggatgctat actgagaatt gtgggtgaac ttgagcagat ggtttctgag
2281 gacgtcccgc tggaccaccg cgttcacgcc cgcatcattg gtgcccgcgg caaagccatt
2341 cgcaaaatca tggacgaatt caaggtggac attcgcttcc cacagagcgg agccccagac
2401 cccaactgcg tcactgtgac ggggctccca gagaatgtgg aggaagccat cgaccacatc
2461 ctcaatctgg aggaggaata cctagctgac gtggtggaca gtgaggcgct gcaggtatac
2521 atgaaacccc cagcacacga agaggccaag gcaccttcca gaggctttgt ggtgcgggac
2581 gcaccctgga ccgccagcag cagtgagaag gctcctgaca tgagcagctc tgaggaattt
2641 cccagctttg gggctcaggt ggctcccaag accctccctt ggggccccaa acgataatga
2701 tcaaaaagaa cagaaccctc tccagcctgc tgacccgaac ccaaccacac aatggtttgt
2761 ctcaatctga cccagcggct ggaccctccg taaattgttg acgctcttcc cccttcccga
2821 ggtcccgcag ggagcctagc gcctggctgt gtgtgcggcc gctcctccag gcctggccgt
2881 gcccgctcag gacctgctcc actgtttaac actaaaccaa ggtcatgagc attcgtgcta
2941 agataacaga ctccagctcc tggtccaccc ggcatgtcag tcagcactct ggccttcatc
3001 acgagagctc cgcagccgtg gctaggattc cacttcctgt gtcatgacct caggaaataa
3061 acgtccttga ctttataaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3121 aaaaaaaaaa aaaaaaaaaa aaa
//