LOCUS BC014303 2445 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member 1,
mRNA (cDNA clone MGC:16418 IMAGE:3942586), complete cds.
ACCESSION BC014303
VERSION BC014303.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2445)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2445)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC014303.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: f Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147669.
FEATURES Location/Qualifiers
source 1..2445
/db_xref="H-InvDB:HIT000036628"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16418 IMAGE:3942586"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2445
/gene="SLC39A1"
/gene_synonym="ZIP1"
/db_xref="GeneID:27173"
/db_xref="HGNC:HGNC:12876"
/db_xref="MIM:604740"
CDS 467..1441
/gene="SLC39A1"
/gene_synonym="ZIP1"
/codon_start=1
/product="solute carrier family 39 (zinc transporter),
member 1"
/protein_id="AAH14303.1"
/db_xref="GeneID:27173"
/db_xref="HGNC:HGNC:12876"
/db_xref="MIM:604740"
/translation="MGPWGEPELLVWRPEAVASEPPVPVGLEVKLGALVLLLVLTLLC
SLVPICVLRRPGANHEGSASRQKALSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAA
LHVTLQFPLQEFILAMGFFLVLVMEQITLAYKEQSGPSPLEETRALLGTVNGGPQHWH
DGPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHK
GILAVSLSLRLLQSHLRAQVVAGCGILFSCMTPLGIGLGAALAESAGPLHQLAQSVLE
GMAAGTFLYITFLEILPQELASSEQRILKVILLLAGFALLTGLLFIQI"
BASE COUNT 487 a 675 c 720 g 563 t
ORIGIN
1 aggagagtca ggccaatggg gccgcagttc tttctttttt ttttctttat tcttattttt
61 ggagacaggg tctcgctctg ttgcccaggc tggagtgcgg tggtgcgatc acggttccat
121 gcagcccccg acctcccggg ctcaggtgat tctcccgcct cagcaccgcg agcagctagg
181 accacaggcg cgagccactg cgtccggccg gcgggactta tttgtcaggc ggggattggg
241 ttccgccagc ctaaagggag gggtaagcgc cagaatatga atcgccggga agctgggaga
301 aagctccggg aaaccctgag cagccaggtc gcctgctccg cccgctcccg ctcccgatct
361 ctgattgctc ctaactgacg tcactcccgg tctgtccccg cccactcggt gctgccattg
421 gcagtcggtc gtgggtctga gagtcactgg agctaccaga agcatcatgg ggccctgggg
481 agagccagag ctcctggtgt ggcgccccga ggcggtagct tcagagcctc cagtgcctgt
541 ggggctggag gtgaagttgg gggccctggt gctgctgctg gtgctcaccc tcctctgcag
601 cctggtgccc atctgtgtgc tgcgccggcc aggagctaac catgaaggct cagcttcccg
661 ccagaaagcc ctgagcctag taagctgttt cgcggggggc gtctttttgg ccacttgtct
721 cctggacctg ctgcctgact acctggctgc catagatgag gccctggcag ccttgcacgt
781 gacgctccag ttcccactgc aagagttcat cctggccatg ggcttcttcc tggtcctggt
841 gatggagcag atcacactgg cttacaagga gcagtcaggg ccgtcacctc tggaggaaac
901 aagggctctg ctgggaacag tgaatggtgg gccgcagcat tggcatgatg ggccaggggt
961 cccacaggcg agtggagccc cagcaacccc ctcagccttg cgtgcctgtg tactggtgtt
1021 ctccctggcc ctccactccg tgttcgaggg gctggcggta gggctgcagc gagaccgggc
1081 tcgggccatg gagctgtgcc tggctttgct gctccacaag ggcatcctgg ctgtcagcct
1141 gtccctgcgg ctgttgcaga gccaccttag ggcacaggtg gtggctggct gtgggatcct
1201 cttctcatgc atgacacctc taggcatcgg gctgggtgca gctctggcag agtcggcagg
1261 acctctgcac cagctggccc agtctgtgct agagggcatg gcagctggca cctttctcta
1321 tatcaccttt ctggaaatcc tgccccagga gctggccagt tctgagcaaa ggatcctcaa
1381 ggtcattctg ctcctagcag gctttgccct gctcactggc ctgctcttca tccaaatcta
1441 gggggcttca agagaggggc aggggagatt gatgatcagg tgcccctgtt ctcccttccc
1501 tcccccagtt gtggggaata ggaaggaaag gggaagggaa atactgagga ccaaaaagtt
1561 ctctgggagc taaagataga gcctttgggg ctatctgact aatgagaggg aagtgggcag
1621 acaagaggct ggccccagtc ccaaggaaca agagatggtc aagtcgctag agacatatca
1681 ggggacatta ggattgggga agacacttga ctgctagaat cagaggttgg acactataca
1741 taaggacagg ctcacatggg aggctggagg tgggtaccca gctgctgtgg aacgggtatg
1801 gacaggtcat aaacctagag tcagtgtcct gttggtccta gcccatttca gcaccctgcc
1861 acttggagtg gacccctcct actcttctta gcgcctaccc tcatacctat ctccctcctc
1921 ccatctccta ggggactggc gccaaatggt ctctccctgc caattttggt atcttctctg
1981 gcctctccag tcctgcttac tcctctattt ttaaagtgcc aaacaaatcc ccttcctctt
2041 tctcaaagca cagtaatgtg gcactgagcc ctacccagca cctcagtgaa gggggcctgc
2101 ttgctcttta ttttggtccc ggatcctggg gtggggcaga aatattttct gggctggggt
2161 aggaggaagg ttgttgcagc catctactgc tgctgtaccc taggaatatg gggacatgga
2221 catggtgtcc catgcccaga tgataaacac tgagctgcca aaacattttt ttaaatacac
2281 ccgaggagcc caagggggaa gggcaatgcc tacccccagc gttatttttg gggagggagg
2341 gctgtgcata gggacatatt ctttagaatc tattttatta actgacctgt tttgggacct
2401 gttacccaaa taaaagatgt ttctagaaaa aaaaaaaaaa aaaaa
//