LOCUS BC014193 1969 bp mRNA linear HUM 23-DEC-2003
DEFINITION Homo sapiens eyes absent homolog 4 (Drosophila), mRNA (cDNA clone
IMAGE:4110403), partial cds.
ACCESSION BC014193
VERSION BC014193.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1969)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1969)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC014193.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: b Column: 5.
FEATURES Location/Qualifiers
source 1..1969
/db_xref="H-InvDB:HIT000088313"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4110403"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1969
/gene="EYA4"
/gene_synonym="DFNA10"
/db_xref="GeneID:2070"
/db_xref="MIM:603550"
CDS <1..1235
/gene="EYA4"
/gene_synonym="DFNA10"
/codon_start=3
/product="EYA4 protein"
/protein_id="AAH14193.2"
/db_xref="GeneID:2070"
/db_xref="MIM:603550"
/translation="YSYQMPGSSFAPSSTIYANNSVSNSTNFSGSQQDYPSYTAFGQN
QYAQYYSASTYGAYMTSNNTADGTPSSTSTYQLQESLPGLTNQPGTDLHPGEFDTMQS
PSTPIKDLDERTCRSSGSKSRGRGRKNNPSPPPDSDLERVFVWDLDETIIVFHSLLTG
SYAQKYGKDPPMAVTLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLS
TYSFATDGFHAAASSANLCLPTGVRGGVDWMRKLAFRYRRVKELYNTYKNNVGGLLGP
AKRDAWLQLRAEIEGLTDSWLTNALKSLSIISTRSNCINVLVTTTQLIPALAKVLLYS
LGGAFPIENIYSATKIGKESCFERIMQRFGRKVVYVVIGDGVEEEQAAKKHNMPFWRI
SSHSDLLALHQALELEYL"
misc_feature 783..1187
/gene="EYA4"
/gene_synonym="DFNA10"
/note="Hydrolase; Region: haloacid dehalogenase-like
hydrolase. This family are structurally different from the
alpha/ beta hydrolase family (pfam00561). This family
includes L-2-haloacid dehalogenase, epoxide hydrolases and
phosphatases. The structure of the family consists of two
domains. One is an inserted four helix bundle, which is
the least well conserved region of the alignment. The rest
of the fold is composed of the core alpha/beta domain"
/db_xref="CDD:pfam00702"
BASE COUNT 607 a 374 c 415 g 573 t
ORIGIN
1 cttattctta ccaaatgcca ggttctagtt ttgcaccatc atctactatt tatgcaaata
61 attcagtttc caattcaacg aatttcagtg gttcacaaca ggattatcca tcctatacag
121 cctttggcca aaaccagtat gcacagtatt attcagcatc aacgtatgga gcgtatatga
181 catcgaataa cacagccgat ggcacaccct cttcaacctc tacttatcag ttgcaggaat
241 ctctcccagg actgactaac caaccaggta cagatcttca cccaggagag ttcgatacca
301 tgcagagtcc ctccacaccc atcaaagatc ttgatgagag aacctgtagg agttctgggt
361 caaagtccag aggaagaggc cggaaaaata atccctcccc gcctcctgat agtgacctgg
421 agcgtgtgtt tgtctgggat ttggatgaaa ccatcattgt ttttcactca ctgctcaccg
481 ggtcttatgc acagaagtat ggcaaggatc cccccatggc tgtaaccctt ggactccgca
541 tggaagaaat gatttttaat cttgctgata ctcatttgtt ttttaatgat ttagaggagt
601 gtgatcaagt tcatatagat gatgtttcct ctgatgataa tgggcaggac ttaagtacct
661 acagttttgc aactgatggc ttccatgcag ctgcaagtag tgcaaacctt tgtttgccaa
721 caggtgtaag aggaggggtt gactggatga ggaagttggc ttttcgttac agaagagtaa
781 aagaattata taacacctac aagaacaacg ttggaggact ccttggccct gccaagaggg
841 atgcctggct acagttaagg gcagagattg aaggtctgac agattcctgg ctaacaaatg
901 cacttaagtc tttatcaatt attagcacta ggagtaactg cataaatgtc ttggtaacga
961 caactcaact gatcccagca cttgcgaagg ttctactcta tagtttagga ggtgctttcc
1021 ccattgagaa tatttacagt gcaactaaaa taggaaaaga aagttgcttt gaacgaataa
1081 tgcaaaggtt tggcagaaaa gtagtgtatg ttgtaattgg ggatggtgta gaagaagaac
1141 aggcagcaaa aaagcacaac atgcccttct ggaggatatc cagtcactca gacctcctgg
1201 ctctccacca agcactggaa ttagagtatt tgtaactgtg ttctttagct ggagatctat
1261 tttttatatt tcaagtacac tgaattttta tgtgtgattc aatgcctctg gctctacaca
1321 tataaattgt cttaatggat gaaatcatat ttggaataaa aattccagaa tgaagaattc
1381 agattgctga atggagttaa actttagtgc tacagaaaag aaactctatg gtcttatatt
1441 tacaacactt taatgggttt tttaaaaatc tgtggaggtt gctggtacac accaaatgag
1501 tccaaactgg aatgagcagc tttagcaaag aactcttacc tggcaaagca gcaacacaca
1561 tgctccgtct gacaaggtgg tcaacaacat tcctcaaaat gggagatctt ctcagccctg
1621 aggtttgaat ctgactttag cctacctaac ccagaaaatc tgaattggaa tgcactcaga
1681 ctgtataagg acagtcctat ttagacatgt aatttgtgta aattattgat gaaaataatt
1741 tactgtgact ttattagcag ctgactttca aagtggatgc aatttttctt tcttttgttg
1801 gggaggggaa tgggagggga aatgggaata taatattgtc tcttttttaa gtttggcaaa
1861 cagaatgttc atactgatgt gttgtgcctt aaagacaaga cagcatttgt gtgttacaat
1921 gtaactttgg ttaaaatctc tgtagataat gaaaaaaaaa aaaaaaaaa
//