LOCUS BC014176 3194 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens ubiquitin specific peptidase 49, mRNA (cDNA clone MGC:20741 IMAGE:4579283), complete cds. ACCESSION BC014176 VERSION BC014176.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3194) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3194) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-SEP-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC014176.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 30 Row: k Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34147686. FEATURES Location/Qualifiers source 1..3194 /db_xref="H-InvDB:HIT000036563" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:20741 IMAGE:4579283" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3194 /gene="USP49" /gene_synonym="MGC20741" /db_xref="GeneID:25862" /db_xref="HGNC:HGNC:20078" CDS 223..2145 /gene="USP49" /gene_synonym="MGC20741" /codon_start=1 /product="ubiquitin specific peptidase 49" /protein_id="AAH14176.1" /db_xref="GeneID:25862" /db_xref="HGNC:HGNC:20078" /translation="MDRCKHVGRLRLAQDHSILNPQKWCCLECATTESVWACLKCSHV ACGRYIEDHALKHFEETGHPLAMEVRDLYVFCYLCKDYVLNDNPEGDLKLLRSSLLAV RGQKQDTPVRRGRTLRSMASGEDVVLPQRAPQGQPQMLTALWYRRQRLLARTLRLWFE KSSRGQAKLEQRRQEEALERKKEEARRRRREVKRRLLEELASTPPRKSARLLLHTPRD AGPAASRPAALPTSRRVPAATLKLRRQPAMAPGVTGLRNLGNTCYMNSILQVLSHLQK FRECFLNLDPSKTEHLFPKATNGKTQLSGKPTNSSATELSLRNDRAEACEREGFCWNG RASISRSLELIQNKEPSSKHISLCRELHTLFRVMWSGKWALVSPFAMLHSVWSLIPAF RGYDQQDAQEFLCELLHKVQQELESEGTTRRILIPFSQRKLTKQVLKVVNTIFHGQLL SQVTCISCNYKSNTIEPFWDLSLEFPERYHCIEKGFVPLNQTECLLTEMLAKFTETEA LEGRIYACDQCNSKRRKSNPKPLVLSEARKQLMIYRLPQVLRLHLKRFRWSGRNHREK IGVHVVFDQVLTMEPYCCRDMLSSLDKETFAYDLSAVVMHHGKGFGSGHYTAYCYNTE GGACALLCGVGDTERG" BASE COUNT 823 a 814 c 864 g 693 t ORIGIN 1 cgcgccctgg tgacagctcg cgcgtgctga tgatggcgat tctttggatg ggaagagacc 61 ttgaaaggac ctctagttta tcctgcaact ccagtcaata tcccacttaa atcattccag 121 gtaatagaga agaggaaacc taaccaatga ctgtggaata atatggaaga agatggaaaa 181 aacttgttta atgggttgag aaagtggcga cttctataag acatggatag atgcaaacat 241 gtagggcggt tacggctcgc ccaggaccac tccatcctga accctcagaa gtggtgctgc 301 ttagagtgtg ccaccaccga gtccgtgtgg gcctgcctca agtgctccca cgtggcctgc 361 ggccgctata ttgaggacca cgccctgaaa cactttgagg agacgggaca cccgctagcc 421 atggaagtcc gggatctcta cgtgttctgt tacctgtgca aggactacgt gctcaatgat 481 aacccagagg gggacctgaa gctgctaaga agctccctcc tggcggtccg gggccagaaa 541 caggacacgc cggtgagacg tgggcggacg ctgcggtcca tggcttcggg tgaggacgtg 601 gtcctgccgc agcgcgctcc tcagggacag ccgcagatgc tcacggctct gtggtaccgg 661 cgtcagcgcc tgctggccag gacgctgcgg ctgtggttcg agaagagctc ccggggccag 721 gcgaagctgg agcagcggcg gcaggaggag gccctggagc gcaagaagga ggaggcgcgg 781 aggcggcggc gcgaggtgaa acggcggctg ctggaggagc tggccagcac ccctccgcgc 841 aagagtgcac ggctgctcct gcacacgccc cgcgacgcgg gcccggctgc ctcgcgcccc 901 gccgccctcc ctacctcacg cagagtgccc gccgccacac tcaagctgcg tcgccagccg 961 gccatggccc caggcgtcac gggcctgcgc aacctgggca acacctgcta catgaactcc 1021 atcctccagg tgctcagcca cctccagaag ttccgagaat gtttcctcaa ccttgaccct 1081 tccaaaacgg aacatctgtt tcccaaagcc accaacggga agactcagct ttctggcaag 1141 ccaaccaaca gctcggccac ggagctgtcc ttgagaaatg acagggccga ggcatgcgag 1201 cgggagggct tctgctggaa cggcagggcc tccattagtc ggagtctgga gctcatccag 1261 aacaaggagc cgagttcaaa gcacatttcc ctctgccgtg aactgcacac cctcttccga 1321 gtcatgtggt ccgggaagtg ggccctagtg tcgcccttcg ccatgctgca ctcagtgtgg 1381 agcctgatcc ctgccttccg cggctacgac caacaggacg cgcaggaatt tctctgcgag 1441 ctgctgcaca aggtgcagca ggaactcgag tctgagggca ccacacgccg gatcctcatc 1501 cccttctccc agaggaagct caccaaacag gtcttaaagg tggtgaatac catatttcat 1561 gggcagctgc tcagtcaggt cacatgtata tcatgcaatt acaaatccaa taccattgag 1621 cccttttggg acctatccct ggaattccct gaacgctatc actgcataga aaaggggttt 1681 gtccctttga atcaaacaga gtgcttgctc actgagatgc tggccaaatt cacagagaca 1741 gaggccctgg aagggagaat ctacgcttgt gaccagtgta acagcaaacg acgaaaatcc 1801 aatcccaaac cccttgttct gagtgaagct agaaagcagt taatgatcta cagactacct 1861 caggttctcc ggctgcacct taaaagattc aggtggtctg gccgtaatca tcgagagaag 1921 attggggtcc atgtcgtctt tgaccaggta ttaaccatgg aaccttactg ctgcagggac 1981 atgctctcct ctcttgacaa agagaccttt gcctatgatc tctccgcagt ggtcatgcat 2041 cacgggaaag ggtttggctc aggacactac acagcctatt gctacaacac agagggaggt 2101 gcgtgcgctt tactctgtgg ggtgggggac acggaaaggg gttgatttgt ccacatttta 2161 ttgttttcct tttatttcca tcccatggat tacctagagg gaaattacat acatcaaaaa 2221 tccagtggaa agaattgtga aaattgggtt gggcgccgtg gctcacacct gtaatcctag 2281 cgctttggga ggccgcggtg ggtggatcac ctgaggtcag gagttcgaga ccagcctggc 2341 caacatggtt aaaccccgtc tctactaaaa tagtacaaaa attagccggg cgtggtggtg 2401 ggcactggta atcccaggta ctcaagaggc tgaggcagga gaatcgcttg aacctgggag 2461 gcagaggttg cagtgagcca agattatgcc actgcacttc agcctgggtg acagagcaag 2521 actcttatct caaaaaaaat aaaaagaatt atgaaagttg gattcaaatt ttgggtatat 2581 tactaagtaa caacatatgg ttgttctaag aattaaaagg aactgacatg taaaagtgct 2641 tagaacagga cctaggccct gtgcaatggc tcacacctgt aattccaaca ctttgggagg 2701 cagaggcggg aggattgctt gaggccgagg gttcaagact agcctgggca acatagcgag 2761 actgcatctc tacaaaaaat ttaaaaatta tccaggtgta atggtgtgca cctgtgatcc 2821 tagctacttg ggaggctgag gtgggagaat tgctcaagcc caggagtttg aagttgcaat 2881 gagctatgat ttcaccactg cattctagcc tgggcaacag agtgagatcc tgactcaaat 2941 aaataaataa gaagagcagt tgcctaccac atagtactta ttcagtcagt gttagaggat 3001 attgtagtat tatcaaaagt attggttatt gataatatta ctgttttgtg gtaatgctac 3061 ttctgcacac cccagtttcc ttcttggtta tgcagaaaca gtagaacctg tgtaacctca 3121 aggagatatt gtatgaatct cactagccgc agcttataat aaagccgaga acatttaaaa 3181 aaaaaaaaaa aaaa //